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Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans
This genome announcement includes draft genomes from Claviceps purpurea s.lat., including C. arundinis, C. humidiphila and C. cf. spartinae. The draft genomes of Davidsoniella eucalypti, Quambalaria eucalypti and Teratosphaeria destructans, all three important eucalyptus pathogens, are presented. Th...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
International Mycological Association
2018
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| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6317589/ https://www.ncbi.nlm.nih.gov/pubmed/30622889 http://dx.doi.org/10.5598/imafungus.2018.09.02.10 |
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| author | Wingfield, Brenda D. Liu, Miao Nguyen, Hai D.T. Lane, Frances A. Morgan, Seamus W. De Vos, Lieschen Wilken, P. Markus Duong, Tuan A. Aylward, Janneke Coetzee, Martin P.A. Dadej, Kasia De Beer, Z. Wilhelm Findlay, Wendy Havenga, Minette Kolařík, Miroslav Menzies, Jim G. Naidoo, Kershney Pochopski, Olivia Shoukouhi, Parivash Santana, Quentin C. Seifert, Keith A. Soal, Nicole Steenkamp, Emma T. Tatham, Catherine T. van der Nest, Margriet A. Wingfield, Michael J. |
| author_facet | Wingfield, Brenda D. Liu, Miao Nguyen, Hai D.T. Lane, Frances A. Morgan, Seamus W. De Vos, Lieschen Wilken, P. Markus Duong, Tuan A. Aylward, Janneke Coetzee, Martin P.A. Dadej, Kasia De Beer, Z. Wilhelm Findlay, Wendy Havenga, Minette Kolařík, Miroslav Menzies, Jim G. Naidoo, Kershney Pochopski, Olivia Shoukouhi, Parivash Santana, Quentin C. Seifert, Keith A. Soal, Nicole Steenkamp, Emma T. Tatham, Catherine T. van der Nest, Margriet A. Wingfield, Michael J. |
| author_sort | Wingfield, Brenda D. |
| collection | PubMed |
| description | This genome announcement includes draft genomes from Claviceps purpurea s.lat., including C. arundinis, C. humidiphila and C. cf. spartinae. The draft genomes of Davidsoniella eucalypti, Quambalaria eucalypti and Teratosphaeria destructans, all three important eucalyptus pathogens, are presented. The insect associate Grosmannia galeiformis is also described. The pine pathogen genome of Fusarium circinatum has been assembled into pseudomolecules, based on additional sequence data and by harnessing the known synteny within the Fusarium fujikuroi species complex. This new assembly of the F. circinatum genome provides 12 pseudomolecules that correspond to the haploid chromosome number of F. circinatum. These are comparable to other chromosomal assemblies within the FFSC and will enable more robust genomic comparisons within this species complex. |
| format | Online Article Text |
| id | pubmed-6317589 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2018 |
| publisher | International Mycological Association |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-63175892019-01-08 Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans Wingfield, Brenda D. Liu, Miao Nguyen, Hai D.T. Lane, Frances A. Morgan, Seamus W. De Vos, Lieschen Wilken, P. Markus Duong, Tuan A. Aylward, Janneke Coetzee, Martin P.A. Dadej, Kasia De Beer, Z. Wilhelm Findlay, Wendy Havenga, Minette Kolařík, Miroslav Menzies, Jim G. Naidoo, Kershney Pochopski, Olivia Shoukouhi, Parivash Santana, Quentin C. Seifert, Keith A. Soal, Nicole Steenkamp, Emma T. Tatham, Catherine T. van der Nest, Margriet A. Wingfield, Michael J. IMA Fungus Article This genome announcement includes draft genomes from Claviceps purpurea s.lat., including C. arundinis, C. humidiphila and C. cf. spartinae. The draft genomes of Davidsoniella eucalypti, Quambalaria eucalypti and Teratosphaeria destructans, all three important eucalyptus pathogens, are presented. The insect associate Grosmannia galeiformis is also described. The pine pathogen genome of Fusarium circinatum has been assembled into pseudomolecules, based on additional sequence data and by harnessing the known synteny within the Fusarium fujikuroi species complex. This new assembly of the F. circinatum genome provides 12 pseudomolecules that correspond to the haploid chromosome number of F. circinatum. These are comparable to other chromosomal assemblies within the FFSC and will enable more robust genomic comparisons within this species complex. International Mycological Association 2018-12-14 2018-07 /pmc/articles/PMC6317589/ /pubmed/30622889 http://dx.doi.org/10.5598/imafungus.2018.09.02.10 Text en © 2018 International Mycological Association http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
| spellingShingle | Article Wingfield, Brenda D. Liu, Miao Nguyen, Hai D.T. Lane, Frances A. Morgan, Seamus W. De Vos, Lieschen Wilken, P. Markus Duong, Tuan A. Aylward, Janneke Coetzee, Martin P.A. Dadej, Kasia De Beer, Z. Wilhelm Findlay, Wendy Havenga, Minette Kolařík, Miroslav Menzies, Jim G. Naidoo, Kershney Pochopski, Olivia Shoukouhi, Parivash Santana, Quentin C. Seifert, Keith A. Soal, Nicole Steenkamp, Emma T. Tatham, Catherine T. van der Nest, Margriet A. Wingfield, Michael J. Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans |
| title | Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans |
| title_full | Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans |
| title_fullStr | Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans |
| title_full_unstemmed | Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans |
| title_short | Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans |
| title_sort | nine draft genome sequences of claviceps purpurea s.lat., including c. arundinis, c. humidiphila, and c. cf. spartinae, pseudomolecules for the pitch canker pathogen fusarium circinatum, draft genome of davidsoniella eucalypti, grosmannia galeiformis, quambalaria eucalypti, and teratosphaeria destructans |
| topic | Article |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6317589/ https://www.ncbi.nlm.nih.gov/pubmed/30622889 http://dx.doi.org/10.5598/imafungus.2018.09.02.10 |
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