Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient

In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp (N(50), 4,127,869 bp), a complete...

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Detalles Bibliográficos
Autores principales: Humphrey, Jennie, Seitz, Taylor, Haan, Tracie, Ducluzeau, Anne-Lise, Drown, Devin M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6318373/
https://www.ncbi.nlm.nih.gov/pubmed/30637402
http://dx.doi.org/10.1128/MRA.01486-18
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author Humphrey, Jennie
Seitz, Taylor
Haan, Tracie
Ducluzeau, Anne-Lise
Drown, Devin M.
author_facet Humphrey, Jennie
Seitz, Taylor
Haan, Tracie
Ducluzeau, Anne-Lise
Drown, Devin M.
author_sort Humphrey, Jennie
collection PubMed
description In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp (N(50), 4,127,869 bp), a complete chromosome with three plasmids.
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spelling pubmed-63183732019-01-11 Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient Humphrey, Jennie Seitz, Taylor Haan, Tracie Ducluzeau, Anne-Lise Drown, Devin M. Microbiol Resour Announc Genome Sequences In this report, we describe the complete genome assembly of a Pantoea agglomerans isolate, TH81, collected from a boreal forest soil associated with permafrost thaw. Using both Nanopore and Illumina sequences, we assembled four circular contigs totaling 4,983,504 bp (N(50), 4,127,869 bp), a complete chromosome with three plasmids. American Society for Microbiology 2019-01-03 /pmc/articles/PMC6318373/ /pubmed/30637402 http://dx.doi.org/10.1128/MRA.01486-18 Text en Copyright © 2019 Humphrey et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Humphrey, Jennie
Seitz, Taylor
Haan, Tracie
Ducluzeau, Anne-Lise
Drown, Devin M.
Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_full Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_fullStr Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_full_unstemmed Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_short Complete Genome Sequence of Pantoea agglomerans TH81, Isolated from a Permafrost Thaw Gradient
title_sort complete genome sequence of pantoea agglomerans th81, isolated from a permafrost thaw gradient
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6318373/
https://www.ncbi.nlm.nih.gov/pubmed/30637402
http://dx.doi.org/10.1128/MRA.01486-18
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