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Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans
Callose plays a critical role in different biological processes including development as well as in the response to multiple biotic and abiotic stresses. In this study, we characterized the callose deposition in cotyledons of different Brassica napus varieties post-inoculated with different Leptosph...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6320764/ https://www.ncbi.nlm.nih.gov/pubmed/30486431 http://dx.doi.org/10.3390/ijms19123769 |
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author | Liu, Fei Zou, Zhongwei Fernando, W. G. Dilantha |
author_facet | Liu, Fei Zou, Zhongwei Fernando, W. G. Dilantha |
author_sort | Liu, Fei |
collection | PubMed |
description | Callose plays a critical role in different biological processes including development as well as in the response to multiple biotic and abiotic stresses. In this study, we characterized the callose deposition in cotyledons of different Brassica napus varieties post-inoculated with different Leptosphaeria maculans isolates. Further, members of the callose synthase gene were identified from the whole genome of B. napus using the 12 Arabidopsis thaniana callose synthase protein sequences, and were then classified into three groups based on their phylogenetic relationships. Chromosomal location and duplication patterns indicated uneven distribution and segmental duplication patterns of BnCalS genes in the B. napus genome. Subsequently, gene structures, conserved domains analysis, and protein properties were analyzed for BnCalS genes. In addition, 12 B. napus orthologs of the AtCalS were selected for investigating the tissue expression pattern, indicating diverse expression patterns for these BnCalS genes. Responses of the selected 12 orthologs and all the BnCalS genes were characterized in the different types (AvrLm1-Rlm1, AvrLm4-Rlm4, AvrLepR1-LepR1) of B. napus–L. maculans interactions and B. napus-Leptosphaeria biglobosa interactions, implying their potential roles in response to Leptosphaeria infection. |
format | Online Article Text |
id | pubmed-6320764 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-63207642019-01-07 Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans Liu, Fei Zou, Zhongwei Fernando, W. G. Dilantha Int J Mol Sci Article Callose plays a critical role in different biological processes including development as well as in the response to multiple biotic and abiotic stresses. In this study, we characterized the callose deposition in cotyledons of different Brassica napus varieties post-inoculated with different Leptosphaeria maculans isolates. Further, members of the callose synthase gene were identified from the whole genome of B. napus using the 12 Arabidopsis thaniana callose synthase protein sequences, and were then classified into three groups based on their phylogenetic relationships. Chromosomal location and duplication patterns indicated uneven distribution and segmental duplication patterns of BnCalS genes in the B. napus genome. Subsequently, gene structures, conserved domains analysis, and protein properties were analyzed for BnCalS genes. In addition, 12 B. napus orthologs of the AtCalS were selected for investigating the tissue expression pattern, indicating diverse expression patterns for these BnCalS genes. Responses of the selected 12 orthologs and all the BnCalS genes were characterized in the different types (AvrLm1-Rlm1, AvrLm4-Rlm4, AvrLepR1-LepR1) of B. napus–L. maculans interactions and B. napus-Leptosphaeria biglobosa interactions, implying their potential roles in response to Leptosphaeria infection. MDPI 2018-11-27 /pmc/articles/PMC6320764/ /pubmed/30486431 http://dx.doi.org/10.3390/ijms19123769 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Liu, Fei Zou, Zhongwei Fernando, W. G. Dilantha Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans |
title | Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans |
title_full | Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans |
title_fullStr | Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans |
title_full_unstemmed | Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans |
title_short | Characterization of Callose Deposition and Analysis of the Callose Synthase Gene Family of Brassica napus in Response to Leptosphaeria maculans |
title_sort | characterization of callose deposition and analysis of the callose synthase gene family of brassica napus in response to leptosphaeria maculans |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6320764/ https://www.ncbi.nlm.nih.gov/pubmed/30486431 http://dx.doi.org/10.3390/ijms19123769 |
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