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An Efficient Classifier for Alzheimer’s Disease Genes Identification
Alzheimer’s disease (AD) is considered to one of 10 key diseases leading to death in humans. AD is considered the main cause of brain degeneration, and will lead to dementia. It is beneficial for affected patients to be diagnosed with the disease at an early stage so that efforts to manage the patie...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321377/ https://www.ncbi.nlm.nih.gov/pubmed/30501121 http://dx.doi.org/10.3390/molecules23123140 |
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author | Xu, Lei Liang, Guangmin Liao, Changrui Chen, Gin-Den Chang, Chi-Chang |
author_facet | Xu, Lei Liang, Guangmin Liao, Changrui Chen, Gin-Den Chang, Chi-Chang |
author_sort | Xu, Lei |
collection | PubMed |
description | Alzheimer’s disease (AD) is considered to one of 10 key diseases leading to death in humans. AD is considered the main cause of brain degeneration, and will lead to dementia. It is beneficial for affected patients to be diagnosed with the disease at an early stage so that efforts to manage the patient can begin as soon as possible. Most existing protocols diagnose AD by way of magnetic resonance imaging (MRI). However, because the size of the images produced is large, existing techniques that employ MRI technology are expensive and time-consuming to perform. With this in mind, in the current study, AD is predicted instead by the use of a support vector machine (SVM) method based on gene-coding protein sequence information. In our proposed method, the frequency of two consecutive amino acids is used to describe the sequence information. The accuracy of the proposed method for identifying AD is 85.7%, which is demonstrated by the obtained experimental results. The experimental results also show that the sequence information of gene-coding proteins can be used to predict AD. |
format | Online Article Text |
id | pubmed-6321377 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-63213772019-01-14 An Efficient Classifier for Alzheimer’s Disease Genes Identification Xu, Lei Liang, Guangmin Liao, Changrui Chen, Gin-Den Chang, Chi-Chang Molecules Article Alzheimer’s disease (AD) is considered to one of 10 key diseases leading to death in humans. AD is considered the main cause of brain degeneration, and will lead to dementia. It is beneficial for affected patients to be diagnosed with the disease at an early stage so that efforts to manage the patient can begin as soon as possible. Most existing protocols diagnose AD by way of magnetic resonance imaging (MRI). However, because the size of the images produced is large, existing techniques that employ MRI technology are expensive and time-consuming to perform. With this in mind, in the current study, AD is predicted instead by the use of a support vector machine (SVM) method based on gene-coding protein sequence information. In our proposed method, the frequency of two consecutive amino acids is used to describe the sequence information. The accuracy of the proposed method for identifying AD is 85.7%, which is demonstrated by the obtained experimental results. The experimental results also show that the sequence information of gene-coding proteins can be used to predict AD. MDPI 2018-11-29 /pmc/articles/PMC6321377/ /pubmed/30501121 http://dx.doi.org/10.3390/molecules23123140 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Xu, Lei Liang, Guangmin Liao, Changrui Chen, Gin-Den Chang, Chi-Chang An Efficient Classifier for Alzheimer’s Disease Genes Identification |
title | An Efficient Classifier for Alzheimer’s Disease Genes Identification |
title_full | An Efficient Classifier for Alzheimer’s Disease Genes Identification |
title_fullStr | An Efficient Classifier for Alzheimer’s Disease Genes Identification |
title_full_unstemmed | An Efficient Classifier for Alzheimer’s Disease Genes Identification |
title_short | An Efficient Classifier for Alzheimer’s Disease Genes Identification |
title_sort | efficient classifier for alzheimer’s disease genes identification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321377/ https://www.ncbi.nlm.nih.gov/pubmed/30501121 http://dx.doi.org/10.3390/molecules23123140 |
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