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Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)

In plants, the HAK (high-affinity K(+))/KUP (K(+) uptake)/KT (K(+) transporter) family represents a large group of potassium transporters that play important roles in plant growth and environmental adaptation. Although HAK/KUP/KT genes have been extensively investigated in many plant species, they r...

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Detalles Bibliográficos
Autores principales: Cheng, Xiyong, Liu, Xiaodan, Mao, Weiwei, Zhang, Xurui, Chen, Shulin, Zhan, Kehui, Bi, Huihui, Xu, Haixia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321448/
https://www.ncbi.nlm.nih.gov/pubmed/30544665
http://dx.doi.org/10.3390/ijms19123969
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author Cheng, Xiyong
Liu, Xiaodan
Mao, Weiwei
Zhang, Xurui
Chen, Shulin
Zhan, Kehui
Bi, Huihui
Xu, Haixia
author_facet Cheng, Xiyong
Liu, Xiaodan
Mao, Weiwei
Zhang, Xurui
Chen, Shulin
Zhan, Kehui
Bi, Huihui
Xu, Haixia
author_sort Cheng, Xiyong
collection PubMed
description In plants, the HAK (high-affinity K(+))/KUP (K(+) uptake)/KT (K(+) transporter) family represents a large group of potassium transporters that play important roles in plant growth and environmental adaptation. Although HAK/KUP/KT genes have been extensively investigated in many plant species, they remain uncharacterized in wheat, especially those involved in the response to environmental stresses. In this study, 56 wheat HAK/KUP/KT (hereafter called TaHAKs) genes were identified by a genome-wide search using recently released wheat genomic data. Phylogenetic analysis grouped these genes into four clusters (Ι, II, III, IV), containing 22, 19, 7 and 8 genes, respectively. Chromosomal distribution, gene structure, and conserved motif analyses of the 56 TaHAK genes were subsequently performed. In silico RNA-seq data analysis revealed that TaHAKs from clusters II and III are constitutively expressed in various wheat tissues, while most genes from clusters I and IV have very low expression levels in the examined tissues at different developmental stages. qRT-PCR analysis showed that expression levels of TaHAK genes in wheat seedlings were significantly up- or downregulated when seedlings were exposed to K(+) deficiency, high salinity, or dehydration. Furthermore, we functionally characterized TaHAK1b-2BL and showed that it facilitates K(+) transport in yeast. Collectively, these results provide valuable information for further functional studies of TaHAKs, and contribute to a better understanding of the molecular basis of wheat development and stress tolerance.
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spelling pubmed-63214482019-01-07 Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.) Cheng, Xiyong Liu, Xiaodan Mao, Weiwei Zhang, Xurui Chen, Shulin Zhan, Kehui Bi, Huihui Xu, Haixia Int J Mol Sci Article In plants, the HAK (high-affinity K(+))/KUP (K(+) uptake)/KT (K(+) transporter) family represents a large group of potassium transporters that play important roles in plant growth and environmental adaptation. Although HAK/KUP/KT genes have been extensively investigated in many plant species, they remain uncharacterized in wheat, especially those involved in the response to environmental stresses. In this study, 56 wheat HAK/KUP/KT (hereafter called TaHAKs) genes were identified by a genome-wide search using recently released wheat genomic data. Phylogenetic analysis grouped these genes into four clusters (Ι, II, III, IV), containing 22, 19, 7 and 8 genes, respectively. Chromosomal distribution, gene structure, and conserved motif analyses of the 56 TaHAK genes were subsequently performed. In silico RNA-seq data analysis revealed that TaHAKs from clusters II and III are constitutively expressed in various wheat tissues, while most genes from clusters I and IV have very low expression levels in the examined tissues at different developmental stages. qRT-PCR analysis showed that expression levels of TaHAK genes in wheat seedlings were significantly up- or downregulated when seedlings were exposed to K(+) deficiency, high salinity, or dehydration. Furthermore, we functionally characterized TaHAK1b-2BL and showed that it facilitates K(+) transport in yeast. Collectively, these results provide valuable information for further functional studies of TaHAKs, and contribute to a better understanding of the molecular basis of wheat development and stress tolerance. MDPI 2018-12-10 /pmc/articles/PMC6321448/ /pubmed/30544665 http://dx.doi.org/10.3390/ijms19123969 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cheng, Xiyong
Liu, Xiaodan
Mao, Weiwei
Zhang, Xurui
Chen, Shulin
Zhan, Kehui
Bi, Huihui
Xu, Haixia
Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)
title Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)
title_full Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)
title_fullStr Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)
title_full_unstemmed Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)
title_short Genome-Wide Identification and Analysis of HAK/KUP/KT Potassium Transporters Gene Family in Wheat (Triticum aestivum L.)
title_sort genome-wide identification and analysis of hak/kup/kt potassium transporters gene family in wheat (triticum aestivum l.)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321448/
https://www.ncbi.nlm.nih.gov/pubmed/30544665
http://dx.doi.org/10.3390/ijms19123969
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