mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species

Assembly of bacterial short-read whole-genome sequencing data frequently results in hundreds of contigs for which the origin, plasmid or chromosome, is unclear. Complete genomes resolved by long-read sequencing can be used to generate and label short-read contigs. These were used to train several po...

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Detalles Bibliográficos
Autores principales: Arredondo-Alonso, Sergio, Rogers, Malbert R. C., Braat, Johanna C., Verschuuren, Tess D., Top, Janetta, Corander, Jukka, Willems, Rob J. L., Schürch, Anita C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Microbiology Society 2018
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321875/
https://www.ncbi.nlm.nih.gov/pubmed/30383524
http://dx.doi.org/10.1099/mgen.0.000224

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321875/
https://www.ncbi.nlm.nih.gov/pubmed/30383524
http://dx.doi.org/10.1099/mgen.0.000224

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