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Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code
This article provides data for five different neuropsychiatric disorders—Attention Deficit Hyperactivity Disorder, Alzheimer's Disease, Autism Spectrum Disorder, Post-Traumatic Stress Disorder, and Post-Concussion Syndrome–along with healthy controls. The data includes clinical diagnostic label...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321965/ https://www.ncbi.nlm.nih.gov/pubmed/30627610 http://dx.doi.org/10.1016/j.dib.2018.01.080 |
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author | Zhao, Xinyu Rangaprakash, D. Denney, Thomas S. Katz, Jeffrey S. Dretsch, Michael N. Deshpande, Gopikrishna |
author_facet | Zhao, Xinyu Rangaprakash, D. Denney, Thomas S. Katz, Jeffrey S. Dretsch, Michael N. Deshpande, Gopikrishna |
author_sort | Zhao, Xinyu |
collection | PubMed |
description | This article provides data for five different neuropsychiatric disorders—Attention Deficit Hyperactivity Disorder, Alzheimer's Disease, Autism Spectrum Disorder, Post-Traumatic Stress Disorder, and Post-Concussion Syndrome–along with healthy controls. The data includes clinical diagnostic labels, phenotypic variables, and resting-state functional magnetic resonance imaging connectivity features obtained from individuals. In addition, it provides the source MATLAB codes used for data analyses. Three existing clustering methods have been incorporated into the provided code, which do not require a priori specification of the number of clusters. A genetic algorithm based feature selection method has also been included to find the relevant subset of features and clustering the subset of data simultaneously. Findings from this data set and further detailed interpretations are available in our recent research study (Zhao et al., 2017) [1]. This contribution is a valuable asset for performing unsupervised machine learning on fMRI data to investigate the correspondence of clinical diagnostic grouping with the underlying neurobiological/phenotypic clusters. |
format | Online Article Text |
id | pubmed-6321965 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-63219652019-01-09 Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code Zhao, Xinyu Rangaprakash, D. Denney, Thomas S. Katz, Jeffrey S. Dretsch, Michael N. Deshpande, Gopikrishna Data Brief Neuroscience This article provides data for five different neuropsychiatric disorders—Attention Deficit Hyperactivity Disorder, Alzheimer's Disease, Autism Spectrum Disorder, Post-Traumatic Stress Disorder, and Post-Concussion Syndrome–along with healthy controls. The data includes clinical diagnostic labels, phenotypic variables, and resting-state functional magnetic resonance imaging connectivity features obtained from individuals. In addition, it provides the source MATLAB codes used for data analyses. Three existing clustering methods have been incorporated into the provided code, which do not require a priori specification of the number of clusters. A genetic algorithm based feature selection method has also been included to find the relevant subset of features and clustering the subset of data simultaneously. Findings from this data set and further detailed interpretations are available in our recent research study (Zhao et al., 2017) [1]. This contribution is a valuable asset for performing unsupervised machine learning on fMRI data to investigate the correspondence of clinical diagnostic grouping with the underlying neurobiological/phenotypic clusters. Elsevier 2018-02-02 /pmc/articles/PMC6321965/ /pubmed/30627610 http://dx.doi.org/10.1016/j.dib.2018.01.080 Text en © 2018 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Neuroscience Zhao, Xinyu Rangaprakash, D. Denney, Thomas S. Katz, Jeffrey S. Dretsch, Michael N. Deshpande, Gopikrishna Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code |
title | Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code |
title_full | Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code |
title_fullStr | Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code |
title_full_unstemmed | Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code |
title_short | Identifying neuropsychiatric disorders using unsupervised clustering methods: Data and code |
title_sort | identifying neuropsychiatric disorders using unsupervised clustering methods: data and code |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6321965/ https://www.ncbi.nlm.nih.gov/pubmed/30627610 http://dx.doi.org/10.1016/j.dib.2018.01.080 |
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