Cargando…

Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11

BACKGROUND: Transmission patterns in high tuberculosis incidence areas in England are poorly understood but need elucidating to focus contact tracing. We study transmission within and between age, ethnic and immigrant groups using molecular data from the high incidence West Midlands region. METHODS:...

Descripción completa

Detalles Bibliográficos
Autores principales: Vynnycky, Emilia, Keen, Adrienne R., Evans, Jason T., Khanom, Shaina, Hawkey, Peter M., White, Richard G., Abubakar, Ibrahim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323781/
https://www.ncbi.nlm.nih.gov/pubmed/30616539
http://dx.doi.org/10.1186/s12879-018-3585-8
_version_ 1783385836168937472
author Vynnycky, Emilia
Keen, Adrienne R.
Evans, Jason T.
Khanom, Shaina
Hawkey, Peter M.
White, Richard G.
Abubakar, Ibrahim
author_facet Vynnycky, Emilia
Keen, Adrienne R.
Evans, Jason T.
Khanom, Shaina
Hawkey, Peter M.
White, Richard G.
Abubakar, Ibrahim
author_sort Vynnycky, Emilia
collection PubMed
description BACKGROUND: Transmission patterns in high tuberculosis incidence areas in England are poorly understood but need elucidating to focus contact tracing. We study transmission within and between age, ethnic and immigrant groups using molecular data from the high incidence West Midlands region. METHODS: Isolates from culture-confirmed tuberculosis cases during 2007–2011 were typed using 24-locus Mycobacterial Interspersed Repetitive Unit-Variable Number Tandem Repeats (MIRU-VNTR). We estimated the proportion of disease attributable to recent transmission, calculated the proportion of isolates matching those from the two preceding years (“retrospectively clustered”), and identified risk factors for retrospective clustering using multivariate analyses. We calculated the ratio (RCR) between the observed and expected proportion clustered retrospectively within or between age, ethnic and immigrant groups. RESULTS: Of the 2159 available genotypes (79% of culture-confirmed cases), 34% were attributed to recent transmission. The percentage retrospectively clustered decreased from 50 to 24% for 0–14 and ≥ 65 year olds respectively (p = 0.01) and was significantly lower for immigrants than the UK-born. Higher than expected clustering occurred within 15–24 year olds (RCR: 1.4 (95% CI: 1.1–1.8)), several ethnic groups, and between UK-born or long-term immigrants with the UK-born (RCR: 1.8 (95% CI: 1.1–2.4) and 1.6 (95% CI: 1.2–1.9) respectively). CONCLUSIONS: This study is the first to consider “who clusters with whom” in a high incidence area in England, laying the foundation for future whole-genome sequencing work. The higher than expected clustering seen here suggests that preferential mixing between some age, ethnic and immigrant groups occurs; prioritising contact tracing to groups with which cases are most likely to cluster retrospectively could improve TB control. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12879-018-3585-8) contains supplementary material, which is available to authorized users.
format Online
Article
Text
id pubmed-6323781
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-63237812019-01-11 Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11 Vynnycky, Emilia Keen, Adrienne R. Evans, Jason T. Khanom, Shaina Hawkey, Peter M. White, Richard G. Abubakar, Ibrahim BMC Infect Dis Research Article BACKGROUND: Transmission patterns in high tuberculosis incidence areas in England are poorly understood but need elucidating to focus contact tracing. We study transmission within and between age, ethnic and immigrant groups using molecular data from the high incidence West Midlands region. METHODS: Isolates from culture-confirmed tuberculosis cases during 2007–2011 were typed using 24-locus Mycobacterial Interspersed Repetitive Unit-Variable Number Tandem Repeats (MIRU-VNTR). We estimated the proportion of disease attributable to recent transmission, calculated the proportion of isolates matching those from the two preceding years (“retrospectively clustered”), and identified risk factors for retrospective clustering using multivariate analyses. We calculated the ratio (RCR) between the observed and expected proportion clustered retrospectively within or between age, ethnic and immigrant groups. RESULTS: Of the 2159 available genotypes (79% of culture-confirmed cases), 34% were attributed to recent transmission. The percentage retrospectively clustered decreased from 50 to 24% for 0–14 and ≥ 65 year olds respectively (p = 0.01) and was significantly lower for immigrants than the UK-born. Higher than expected clustering occurred within 15–24 year olds (RCR: 1.4 (95% CI: 1.1–1.8)), several ethnic groups, and between UK-born or long-term immigrants with the UK-born (RCR: 1.8 (95% CI: 1.1–2.4) and 1.6 (95% CI: 1.2–1.9) respectively). CONCLUSIONS: This study is the first to consider “who clusters with whom” in a high incidence area in England, laying the foundation for future whole-genome sequencing work. The higher than expected clustering seen here suggests that preferential mixing between some age, ethnic and immigrant groups occurs; prioritising contact tracing to groups with which cases are most likely to cluster retrospectively could improve TB control. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12879-018-3585-8) contains supplementary material, which is available to authorized users. BioMed Central 2019-01-07 /pmc/articles/PMC6323781/ /pubmed/30616539 http://dx.doi.org/10.1186/s12879-018-3585-8 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Vynnycky, Emilia
Keen, Adrienne R.
Evans, Jason T.
Khanom, Shaina
Hawkey, Peter M.
White, Richard G.
Abubakar, Ibrahim
Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11
title Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11
title_full Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11
title_fullStr Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11
title_full_unstemmed Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11
title_short Mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in England, 2007–11
title_sort mycobacterium tuberculosis transmission in an ethnically-diverse high incidence region in england, 2007–11
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323781/
https://www.ncbi.nlm.nih.gov/pubmed/30616539
http://dx.doi.org/10.1186/s12879-018-3585-8
work_keys_str_mv AT vynnyckyemilia mycobacteriumtuberculosistransmissioninanethnicallydiversehighincidenceregioninengland200711
AT keenadrienner mycobacteriumtuberculosistransmissioninanethnicallydiversehighincidenceregioninengland200711
AT evansjasont mycobacteriumtuberculosistransmissioninanethnicallydiversehighincidenceregioninengland200711
AT khanomshaina mycobacteriumtuberculosistransmissioninanethnicallydiversehighincidenceregioninengland200711
AT hawkeypeterm mycobacteriumtuberculosistransmissioninanethnicallydiversehighincidenceregioninengland200711
AT whiterichardg mycobacteriumtuberculosistransmissioninanethnicallydiversehighincidenceregioninengland200711
AT abubakaribrahim mycobacteriumtuberculosistransmissioninanethnicallydiversehighincidenceregioninengland200711