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ETCM: an encyclopaedia of traditional Chinese medicine

Traditional Chinese medicine (TCM) is not only an effective solution for primary health care, but also a great resource for drug innovation and discovery. To meet the increasing needs for TCM-related data resources, we developed ETCM, an Encyclopedia of Traditional Chinese Medicine. ETCM includes co...

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Detalles Bibliográficos
Autores principales: Xu, Hai-Yu, Zhang, Yan-Qiong, Liu, Zhen-Ming, Chen, Tong, Lv, Chuan-Yu, Tang, Shi-Huan, Zhang, Xiao-Bo, Zhang, Wei, Li, Zhi-Yong, Zhou, Rong-Rong, Yang, Hong-Jun, Wang, Xiu-Jie, Huang, Lu-Qi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323948/
https://www.ncbi.nlm.nih.gov/pubmed/30365030
http://dx.doi.org/10.1093/nar/gky987
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author Xu, Hai-Yu
Zhang, Yan-Qiong
Liu, Zhen-Ming
Chen, Tong
Lv, Chuan-Yu
Tang, Shi-Huan
Zhang, Xiao-Bo
Zhang, Wei
Li, Zhi-Yong
Zhou, Rong-Rong
Yang, Hong-Jun
Wang, Xiu-Jie
Huang, Lu-Qi
author_facet Xu, Hai-Yu
Zhang, Yan-Qiong
Liu, Zhen-Ming
Chen, Tong
Lv, Chuan-Yu
Tang, Shi-Huan
Zhang, Xiao-Bo
Zhang, Wei
Li, Zhi-Yong
Zhou, Rong-Rong
Yang, Hong-Jun
Wang, Xiu-Jie
Huang, Lu-Qi
author_sort Xu, Hai-Yu
collection PubMed
description Traditional Chinese medicine (TCM) is not only an effective solution for primary health care, but also a great resource for drug innovation and discovery. To meet the increasing needs for TCM-related data resources, we developed ETCM, an Encyclopedia of Traditional Chinese Medicine. ETCM includes comprehensive and standardized information for the commonly used herbs and formulas of TCM, as well as their ingredients. The herb basic property and quality control standard, formula composition, ingredient drug-likeness, as well as many other information provided by ETCM can serve as a convenient resource for users to obtain thorough information about a herb or a formula. To facilitate functional and mechanistic studies of TCM, ETCM provides predicted target genes of TCM ingredients, herbs, and formulas, according to the chemical fingerprint similarity between TCM ingredients and known drugs. A systematic analysis function is also developed in ETCM, which allows users to explore the relationships or build networks among TCM herbs, formulas,ingredients, gene targets, and related pathways or diseases. ETCM is freely accessible at http://www.nrc.ac.cn:9090/ETCM/. We expect ETCM to develop into a major data warehouse for TCM and to promote TCM related researches and drug development in the future.
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spelling pubmed-63239482019-01-10 ETCM: an encyclopaedia of traditional Chinese medicine Xu, Hai-Yu Zhang, Yan-Qiong Liu, Zhen-Ming Chen, Tong Lv, Chuan-Yu Tang, Shi-Huan Zhang, Xiao-Bo Zhang, Wei Li, Zhi-Yong Zhou, Rong-Rong Yang, Hong-Jun Wang, Xiu-Jie Huang, Lu-Qi Nucleic Acids Res Database Issue Traditional Chinese medicine (TCM) is not only an effective solution for primary health care, but also a great resource for drug innovation and discovery. To meet the increasing needs for TCM-related data resources, we developed ETCM, an Encyclopedia of Traditional Chinese Medicine. ETCM includes comprehensive and standardized information for the commonly used herbs and formulas of TCM, as well as their ingredients. The herb basic property and quality control standard, formula composition, ingredient drug-likeness, as well as many other information provided by ETCM can serve as a convenient resource for users to obtain thorough information about a herb or a formula. To facilitate functional and mechanistic studies of TCM, ETCM provides predicted target genes of TCM ingredients, herbs, and formulas, according to the chemical fingerprint similarity between TCM ingredients and known drugs. A systematic analysis function is also developed in ETCM, which allows users to explore the relationships or build networks among TCM herbs, formulas,ingredients, gene targets, and related pathways or diseases. ETCM is freely accessible at http://www.nrc.ac.cn:9090/ETCM/. We expect ETCM to develop into a major data warehouse for TCM and to promote TCM related researches and drug development in the future. Oxford University Press 2019-01-08 2018-10-26 /pmc/articles/PMC6323948/ /pubmed/30365030 http://dx.doi.org/10.1093/nar/gky987 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Database Issue
Xu, Hai-Yu
Zhang, Yan-Qiong
Liu, Zhen-Ming
Chen, Tong
Lv, Chuan-Yu
Tang, Shi-Huan
Zhang, Xiao-Bo
Zhang, Wei
Li, Zhi-Yong
Zhou, Rong-Rong
Yang, Hong-Jun
Wang, Xiu-Jie
Huang, Lu-Qi
ETCM: an encyclopaedia of traditional Chinese medicine
title ETCM: an encyclopaedia of traditional Chinese medicine
title_full ETCM: an encyclopaedia of traditional Chinese medicine
title_fullStr ETCM: an encyclopaedia of traditional Chinese medicine
title_full_unstemmed ETCM: an encyclopaedia of traditional Chinese medicine
title_short ETCM: an encyclopaedia of traditional Chinese medicine
title_sort etcm: an encyclopaedia of traditional chinese medicine
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323948/
https://www.ncbi.nlm.nih.gov/pubmed/30365030
http://dx.doi.org/10.1093/nar/gky987
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