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Ensembl 2019
The Ensembl project (https://www.ensembl.org) makes key genomic data sets available to the entire scientific community without restrictions. Ensembl seeks to be a fundamental resource driving scientific progress by creating, maintaining and updating reference genome annotation and comparative genomi...
| Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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| Formato: | Online Artículo Texto |
| Lenguaje: | English |
| Publicado: |
Oxford University Press
2019
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| Materias: | |
| Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323964/ https://www.ncbi.nlm.nih.gov/pubmed/30407521 http://dx.doi.org/10.1093/nar/gky1113 |
| _version_ | 1783385880201789440 |
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| author | Cunningham, Fiona Achuthan, Premanand Akanni, Wasiu Allen, James Amode, M Ridwan Armean, Irina M Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Jayantilal Gall, Astrid Girón, Carlos García Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Laird, Matthew R Lavidas, Ilias Liu, Zhicheng Loveland, Jane E Marugán, José C Maurel, Thomas McMahon, Aoife C Moore, Benjamin Morales, Joannella Mudge, Jonathan M Nuhn, Michael Ogeh, Denye Parker, Anne Parton, Andrew Patricio, Mateus Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sparrow, Helen Stapleton, Eloise Szuba, Marek Taylor, Kieron Threadgold, Glen Thormann, Anja Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Frankish, Adam Hunt, Sarah E Kostadima, Myrto Langridge, Nick Martin, Fergal J Muffato, Matthieu Perry, Emily Ruffier, Magali Staines, Daniel M Trevanion, Stephen J Aken, Bronwen L Yates, Andrew D Zerbino, Daniel R Flicek, Paul |
| author_facet | Cunningham, Fiona Achuthan, Premanand Akanni, Wasiu Allen, James Amode, M Ridwan Armean, Irina M Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Jayantilal Gall, Astrid Girón, Carlos García Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Laird, Matthew R Lavidas, Ilias Liu, Zhicheng Loveland, Jane E Marugán, José C Maurel, Thomas McMahon, Aoife C Moore, Benjamin Morales, Joannella Mudge, Jonathan M Nuhn, Michael Ogeh, Denye Parker, Anne Parton, Andrew Patricio, Mateus Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sparrow, Helen Stapleton, Eloise Szuba, Marek Taylor, Kieron Threadgold, Glen Thormann, Anja Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Frankish, Adam Hunt, Sarah E Kostadima, Myrto Langridge, Nick Martin, Fergal J Muffato, Matthieu Perry, Emily Ruffier, Magali Staines, Daniel M Trevanion, Stephen J Aken, Bronwen L Yates, Andrew D Zerbino, Daniel R Flicek, Paul |
| author_sort | Cunningham, Fiona |
| collection | PubMed |
| description | The Ensembl project (https://www.ensembl.org) makes key genomic data sets available to the entire scientific community without restrictions. Ensembl seeks to be a fundamental resource driving scientific progress by creating, maintaining and updating reference genome annotation and comparative genomics resources. This year we describe our new and expanded gene, variant and comparative annotation capabilities, which led to a 50% increase in the number of vertebrate genomes we support. We have also doubled the number of available human variants and added regulatory regions for many mouse cell types and developmental stages. Our data sets and tools are available via the Ensembl website as well as a through a RESTful webservice, Perl application programming interface and as data files for download. |
| format | Online Article Text |
| id | pubmed-6323964 |
| institution | National Center for Biotechnology Information |
| language | English |
| publishDate | 2019 |
| publisher | Oxford University Press |
| record_format | MEDLINE/PubMed |
| spelling | pubmed-63239642019-01-10 Ensembl 2019 Cunningham, Fiona Achuthan, Premanand Akanni, Wasiu Allen, James Amode, M Ridwan Armean, Irina M Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Jayantilal Gall, Astrid Girón, Carlos García Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Laird, Matthew R Lavidas, Ilias Liu, Zhicheng Loveland, Jane E Marugán, José C Maurel, Thomas McMahon, Aoife C Moore, Benjamin Morales, Joannella Mudge, Jonathan M Nuhn, Michael Ogeh, Denye Parker, Anne Parton, Andrew Patricio, Mateus Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sparrow, Helen Stapleton, Eloise Szuba, Marek Taylor, Kieron Threadgold, Glen Thormann, Anja Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Frankish, Adam Hunt, Sarah E Kostadima, Myrto Langridge, Nick Martin, Fergal J Muffato, Matthieu Perry, Emily Ruffier, Magali Staines, Daniel M Trevanion, Stephen J Aken, Bronwen L Yates, Andrew D Zerbino, Daniel R Flicek, Paul Nucleic Acids Res Database Issue The Ensembl project (https://www.ensembl.org) makes key genomic data sets available to the entire scientific community without restrictions. Ensembl seeks to be a fundamental resource driving scientific progress by creating, maintaining and updating reference genome annotation and comparative genomics resources. This year we describe our new and expanded gene, variant and comparative annotation capabilities, which led to a 50% increase in the number of vertebrate genomes we support. We have also doubled the number of available human variants and added regulatory regions for many mouse cell types and developmental stages. Our data sets and tools are available via the Ensembl website as well as a through a RESTful webservice, Perl application programming interface and as data files for download. Oxford University Press 2019-01-08 2018-11-08 /pmc/articles/PMC6323964/ /pubmed/30407521 http://dx.doi.org/10.1093/nar/gky1113 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
| spellingShingle | Database Issue Cunningham, Fiona Achuthan, Premanand Akanni, Wasiu Allen, James Amode, M Ridwan Armean, Irina M Bennett, Ruth Bhai, Jyothish Billis, Konstantinos Boddu, Sanjay Cummins, Carla Davidson, Claire Dodiya, Kamalkumar Jayantilal Gall, Astrid Girón, Carlos García Gil, Laurent Grego, Tiago Haggerty, Leanne Haskell, Erin Hourlier, Thibaut Izuogu, Osagie G Janacek, Sophie H Juettemann, Thomas Kay, Mike Laird, Matthew R Lavidas, Ilias Liu, Zhicheng Loveland, Jane E Marugán, José C Maurel, Thomas McMahon, Aoife C Moore, Benjamin Morales, Joannella Mudge, Jonathan M Nuhn, Michael Ogeh, Denye Parker, Anne Parton, Andrew Patricio, Mateus Abdul Salam, Ahamed Imran Schmitt, Bianca M Schuilenburg, Helen Sheppard, Dan Sparrow, Helen Stapleton, Eloise Szuba, Marek Taylor, Kieron Threadgold, Glen Thormann, Anja Vullo, Alessandro Walts, Brandon Winterbottom, Andrea Zadissa, Amonida Chakiachvili, Marc Frankish, Adam Hunt, Sarah E Kostadima, Myrto Langridge, Nick Martin, Fergal J Muffato, Matthieu Perry, Emily Ruffier, Magali Staines, Daniel M Trevanion, Stephen J Aken, Bronwen L Yates, Andrew D Zerbino, Daniel R Flicek, Paul Ensembl 2019 |
| title | Ensembl 2019 |
| title_full | Ensembl 2019 |
| title_fullStr | Ensembl 2019 |
| title_full_unstemmed | Ensembl 2019 |
| title_short | Ensembl 2019 |
| title_sort | ensembl 2019 |
| topic | Database Issue |
| url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323964/ https://www.ncbi.nlm.nih.gov/pubmed/30407521 http://dx.doi.org/10.1093/nar/gky1113 |
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