Cargando…

The European Nucleotide Archive in 2018

The European Nucleotide Archive (ENA; https://www.ebi.ac.uk/ena), provided from EMBL-EBI, has for more than three decades been responsible for archiving the world's public sequencing data and presenting this important resource to the scientific community to support and accelerate the global res...

Descripción completa

Detalles Bibliográficos
Autores principales: Harrison, Peter W, Alako, Blaise, Amid, Clara, Cerdeño-Tárraga, Ana, Cleland, Iain, Holt, Sam, Hussein, Abdulrahman, Jayathilaka, Suran, Kay, Simon, Keane, Thomas, Leinonen, Rasko, Liu, Xin, Martínez-Villacorta, Josué, Milano, Annalisa, Pakseresht, Nima, Rajan, Jeena, Reddy, Kethi, Richards, Edward, Rosello, Marc, Silvester, Nicole, Smirnov, Dmitriy, Toribio, Ana-Luisa, Vijayaraja, Senthilnathan, Cochrane, Guy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323982/
https://www.ncbi.nlm.nih.gov/pubmed/30395270
http://dx.doi.org/10.1093/nar/gky1078
_version_ 1783385884376170496
author Harrison, Peter W
Alako, Blaise
Amid, Clara
Cerdeño-Tárraga, Ana
Cleland, Iain
Holt, Sam
Hussein, Abdulrahman
Jayathilaka, Suran
Kay, Simon
Keane, Thomas
Leinonen, Rasko
Liu, Xin
Martínez-Villacorta, Josué
Milano, Annalisa
Pakseresht, Nima
Rajan, Jeena
Reddy, Kethi
Richards, Edward
Rosello, Marc
Silvester, Nicole
Smirnov, Dmitriy
Toribio, Ana-Luisa
Vijayaraja, Senthilnathan
Cochrane, Guy
author_facet Harrison, Peter W
Alako, Blaise
Amid, Clara
Cerdeño-Tárraga, Ana
Cleland, Iain
Holt, Sam
Hussein, Abdulrahman
Jayathilaka, Suran
Kay, Simon
Keane, Thomas
Leinonen, Rasko
Liu, Xin
Martínez-Villacorta, Josué
Milano, Annalisa
Pakseresht, Nima
Rajan, Jeena
Reddy, Kethi
Richards, Edward
Rosello, Marc
Silvester, Nicole
Smirnov, Dmitriy
Toribio, Ana-Luisa
Vijayaraja, Senthilnathan
Cochrane, Guy
author_sort Harrison, Peter W
collection PubMed
description The European Nucleotide Archive (ENA; https://www.ebi.ac.uk/ena), provided from EMBL-EBI, has for more than three decades been responsible for archiving the world's public sequencing data and presenting this important resource to the scientific community to support and accelerate the global research effort. Here, we outline ENA services and content in 2018 and provide an overview of a selection of focus areas of development work: extending data coordination services around ENA, sequence submissions through template expansion, early pre-submission validation tools and our move towards a new browser and retrieval infrastructure.
format Online
Article
Text
id pubmed-6323982
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Oxford University Press
record_format MEDLINE/PubMed
spelling pubmed-63239822019-01-10 The European Nucleotide Archive in 2018 Harrison, Peter W Alako, Blaise Amid, Clara Cerdeño-Tárraga, Ana Cleland, Iain Holt, Sam Hussein, Abdulrahman Jayathilaka, Suran Kay, Simon Keane, Thomas Leinonen, Rasko Liu, Xin Martínez-Villacorta, Josué Milano, Annalisa Pakseresht, Nima Rajan, Jeena Reddy, Kethi Richards, Edward Rosello, Marc Silvester, Nicole Smirnov, Dmitriy Toribio, Ana-Luisa Vijayaraja, Senthilnathan Cochrane, Guy Nucleic Acids Res Database Issue The European Nucleotide Archive (ENA; https://www.ebi.ac.uk/ena), provided from EMBL-EBI, has for more than three decades been responsible for archiving the world's public sequencing data and presenting this important resource to the scientific community to support and accelerate the global research effort. Here, we outline ENA services and content in 2018 and provide an overview of a selection of focus areas of development work: extending data coordination services around ENA, sequence submissions through template expansion, early pre-submission validation tools and our move towards a new browser and retrieval infrastructure. Oxford University Press 2019-01-08 2018-11-05 /pmc/articles/PMC6323982/ /pubmed/30395270 http://dx.doi.org/10.1093/nar/gky1078 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Issue
Harrison, Peter W
Alako, Blaise
Amid, Clara
Cerdeño-Tárraga, Ana
Cleland, Iain
Holt, Sam
Hussein, Abdulrahman
Jayathilaka, Suran
Kay, Simon
Keane, Thomas
Leinonen, Rasko
Liu, Xin
Martínez-Villacorta, Josué
Milano, Annalisa
Pakseresht, Nima
Rajan, Jeena
Reddy, Kethi
Richards, Edward
Rosello, Marc
Silvester, Nicole
Smirnov, Dmitriy
Toribio, Ana-Luisa
Vijayaraja, Senthilnathan
Cochrane, Guy
The European Nucleotide Archive in 2018
title The European Nucleotide Archive in 2018
title_full The European Nucleotide Archive in 2018
title_fullStr The European Nucleotide Archive in 2018
title_full_unstemmed The European Nucleotide Archive in 2018
title_short The European Nucleotide Archive in 2018
title_sort european nucleotide archive in 2018
topic Database Issue
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6323982/
https://www.ncbi.nlm.nih.gov/pubmed/30395270
http://dx.doi.org/10.1093/nar/gky1078
work_keys_str_mv AT harrisonpeterw theeuropeannucleotidearchivein2018
AT alakoblaise theeuropeannucleotidearchivein2018
AT amidclara theeuropeannucleotidearchivein2018
AT cerdenotarragaana theeuropeannucleotidearchivein2018
AT clelandiain theeuropeannucleotidearchivein2018
AT holtsam theeuropeannucleotidearchivein2018
AT husseinabdulrahman theeuropeannucleotidearchivein2018
AT jayathilakasuran theeuropeannucleotidearchivein2018
AT kaysimon theeuropeannucleotidearchivein2018
AT keanethomas theeuropeannucleotidearchivein2018
AT leinonenrasko theeuropeannucleotidearchivein2018
AT liuxin theeuropeannucleotidearchivein2018
AT martinezvillacortajosue theeuropeannucleotidearchivein2018
AT milanoannalisa theeuropeannucleotidearchivein2018
AT paksereshtnima theeuropeannucleotidearchivein2018
AT rajanjeena theeuropeannucleotidearchivein2018
AT reddykethi theeuropeannucleotidearchivein2018
AT richardsedward theeuropeannucleotidearchivein2018
AT rosellomarc theeuropeannucleotidearchivein2018
AT silvesternicole theeuropeannucleotidearchivein2018
AT smirnovdmitriy theeuropeannucleotidearchivein2018
AT toribioanaluisa theeuropeannucleotidearchivein2018
AT vijayarajasenthilnathan theeuropeannucleotidearchivein2018
AT cochraneguy theeuropeannucleotidearchivein2018
AT harrisonpeterw europeannucleotidearchivein2018
AT alakoblaise europeannucleotidearchivein2018
AT amidclara europeannucleotidearchivein2018
AT cerdenotarragaana europeannucleotidearchivein2018
AT clelandiain europeannucleotidearchivein2018
AT holtsam europeannucleotidearchivein2018
AT husseinabdulrahman europeannucleotidearchivein2018
AT jayathilakasuran europeannucleotidearchivein2018
AT kaysimon europeannucleotidearchivein2018
AT keanethomas europeannucleotidearchivein2018
AT leinonenrasko europeannucleotidearchivein2018
AT liuxin europeannucleotidearchivein2018
AT martinezvillacortajosue europeannucleotidearchivein2018
AT milanoannalisa europeannucleotidearchivein2018
AT paksereshtnima europeannucleotidearchivein2018
AT rajanjeena europeannucleotidearchivein2018
AT reddykethi europeannucleotidearchivein2018
AT richardsedward europeannucleotidearchivein2018
AT rosellomarc europeannucleotidearchivein2018
AT silvesternicole europeannucleotidearchivein2018
AT smirnovdmitriy europeannucleotidearchivein2018
AT toribioanaluisa europeannucleotidearchivein2018
AT vijayarajasenthilnathan europeannucleotidearchivein2018
AT cochraneguy europeannucleotidearchivein2018