Cargando…

PlanMine 3.0—improvements to a mineable resource of flatworm biology and biodiversity

Flatworms (Platyhelminthes) are a basally branching phylum that harbours a wealth of fascinating biology, including planarians with their astonishing regenerative abilities and the parasitic tape worms and blood flukes that exert a massive impact on human health. PlanMine (http://planmine.mpi-cbg.de...

Descripción completa

Detalles Bibliográficos
Autores principales:	Rozanski, Andrei, Moon, HongKee, Brandl, Holger, Martín-Durán, José M, Grohme, Markus A, Hüttner, Katja, Bartscherer, Kerstin, Henry, Ian, Rink, Jochen C
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2019
Materias:	Database Issue
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6324014/ https://www.ncbi.nlm.nih.gov/pubmed/30496475 http://dx.doi.org/10.1093/nar/gky1070

Ejemplares similares

PlanMine – a mineable resource of planarian biology and biodiversity
por: Brandl, Holger, et al.
Publicado: (2016)

The planarian flatworm: an in vivo model for stem cell biology and nervous system regeneration
por: Gentile, Luca, et al.
Publicado: (2011)

CIBMAN: Database exploring Citrus biodiversity of Manipur
por: Sanabam, Rakesh, et al.
Publicado: (2012)

Convergent evolution of the sensory pits in and within flatworms
por: Gąsiorowski, Ludwik, et al.
Publicado: (2023)

Synchronization of APIIS based farm animal biodiversity systems
por: Duchev, Zhivko, et al.
Publicado: (2006)

Micro-Mar: a database for dynamic representation of marine microbial biodiversity
por: Pushker, Ravindra, et al.
Publicado: (2005)

PINA 3.0: mining cancer interactome
por: Du, Yang, et al.
Publicado: (2020)

The Hawaiian Algal Database: a laboratory LIMS and online resource for biodiversity data
por: Wang, Norman, et al.
Publicado: (2009)

The genome of S. mediterranea and the evolution of cellular core mechanisms
por: Grohme, Markus Alexander, et al.
Publicado: (2018)

A database of schemes that prioritize sites and species based on their conservation value: focusing business on biodiversity
por: Blundell, Arthur G, et al.
Publicado: (2007)

The Hawaiian Freshwater Algal Database (HfwADB): a laboratory LIMS and online biodiversity resource
por: Sherwood, Alison R, et al.
Publicado: (2012)

An integrated pharmacokinetics ontology and corpus for text mining
por: Wu, Heng-Yi, et al.
Publicado: (2013)

Shape Mode Analysis Exposes Movement Patterns in Biology: Flagella and Flatworms as Case Studies
por: Werner, Steffen, et al.
Publicado: (2014)

Extracting scientific articles from a large digital archive: BioStor and the Biodiversity Heritage Library
por: Page, Roderic DM
Publicado: (2011)

KAIKObase: An integrated silkworm genome database and data mining tool
por: Shimomura, Michihiko, et al.
Publicado: (2009)

GarlicESTdb: an online database and mining tool for garlic EST sequences
por: Kim, Dae-Won, et al.
Publicado: (2009)

Global Pharmacopoeia Genome Database is an integrated and mineable genomic database for traditional medicines derived from eight international pharmacopoeias
por: Liao, Baosheng, et al.
Publicado: (2021)

SQUAT: A web tool to mine human, murine and avian SAGE data
por: Leyritz, Johan, et al.
Publicado: (2008)

MiMiR – an integrated platform for microarray data sharing, mining and analysis
por: Tomlinson, Chris, et al.
Publicado: (2008)

7TMRmine: a Web server for hierarchical mining of 7TMR proteins
por: Lu, Guoqing, et al.
Publicado: (2009)

Text-mining applied to autoimmune disease research: the Sjögren’s syndrome knowledge base
por: Gorr, Sven-Ulrik, et al.
Publicado: (2012)

Exploring microproteins from various model organisms using the mip-mining database
por: Zhao, Bowen, et al.
Publicado: (2023)

MeInfoText: associated gene methylation and cancer information from text mining
por: Fang, Yu-Ching, et al.
Publicado: (2008)

MINEs: open access databases of computationally predicted enzyme promiscuity products for untargeted metabolomics
por: Jeffryes, James G, et al.
Publicado: (2015)

Developmental diversity in free-living flatworms
por: Martín-Durán, José María, et al.
Publicado: (2012)

RETINOBASE: a web database, data mining and analysis platform for gene expression data on retina
por: Kalathur, Ravi Kiran Reddy, et al.
Publicado: (2008)

Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets
por: Chelala, Claude, et al.
Publicado: (2007)

GeneKeyDB: A lightweight, gene-centric, relational database to support data mining environments
por: Kirov, SA, et al.
Publicado: (2005)

PepBank - a database of peptides based on sequence text mining and public peptide data sources
por: Shtatland, Timur, et al.
Publicado: (2007)

ConiferEST: an integrated bioinformatics system for data reprocessing and mining of conifer expressed sequence tags (ESTs)
por: Liang, Chun, et al.
Publicado: (2007)

ExSer: A standalone tool to mine protein data bank (PDB) for secondary structural elements
por: Vignesh, Dhandapani, et al.
Publicado: (2010)

PARPs database: A LIMS systems for protein-protein interaction data mining or laboratory information management system
por: Droit, Arnaud, et al.
Publicado: (2007)

TCMGeneDIT: a database for associated traditional Chinese medicine, gene and disease information using text mining
por: Fang, Yu-Ching, et al.
Publicado: (2008)

Construction of an integrated human osteosarcoma database, HOsDb, based on literature mining, microarray analysis, and database retrieval
por: Sun, Yifu, et al.
Publicado: (2020)

KID - an algorithm for fast and efficient text mining used to automatically generate a database containing kinetic information of enzymes
por: Heinen, Stephanie, et al.
Publicado: (2010)

FamPlex: a resource for entity recognition and relationship resolution of human protein families and complexes in biomedical text mining
por: Bachman, John A., et al.
Publicado: (2018)

piRNA-IPdb: a PIWI-bound piRNAs database to mining NGS sncRNA data and beyond
por: Barreñada, Odei, et al.
Publicado: (2021)

AHCODA-DB: a data repository with web-based mining tools for the analysis of automated high-content mouse phenomics data
por: Koopmans, Bastijn, et al.
Publicado: (2017)

ChimerDB 3.0: an enhanced database for fusion genes from cancer transcriptome and literature data mining
por: Lee, Myunggyo, et al.
Publicado: (2017)

Chromosome numbers in three species groups of freshwater flatworms increase with increasing latitude
por: Lorch, Sven, et al.
Publicado: (2016)

Cannot write session to /tmp/vufind_sessions/sess_f250lcf7c3fpsqdmkq14e2navc