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AmtDB: a database of ancient human mitochondrial genomes
Ancient mitochondrial DNA is used for tracing human past demographic events due to its population-level variability. The number of published ancient mitochondrial genomes has increased in recent years, alongside with the development of high-throughput sequencing and capture enrichment methods. Here,...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6324066/ https://www.ncbi.nlm.nih.gov/pubmed/30247677 http://dx.doi.org/10.1093/nar/gky843 |
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author | Ehler, Edvard Novotný, Jiří Juras, Anna Chyleński, Maciej Moravčík, Ondřej Pačes, Jan |
author_facet | Ehler, Edvard Novotný, Jiří Juras, Anna Chyleński, Maciej Moravčík, Ondřej Pačes, Jan |
author_sort | Ehler, Edvard |
collection | PubMed |
description | Ancient mitochondrial DNA is used for tracing human past demographic events due to its population-level variability. The number of published ancient mitochondrial genomes has increased in recent years, alongside with the development of high-throughput sequencing and capture enrichment methods. Here, we present AmtDB, the first database of ancient human mitochondrial genomes. Release version contains 1107 hand-curated ancient samples, freely accessible for download, together with the individual descriptors, including geographic location, radiocarbon dating, and archaeological culture affiliation. The database also features an interactive map for sample location visualization. AmtDB is a key platform for ancient population genetic studies and is available at https://amtdb.org. |
format | Online Article Text |
id | pubmed-6324066 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-63240662019-01-10 AmtDB: a database of ancient human mitochondrial genomes Ehler, Edvard Novotný, Jiří Juras, Anna Chyleński, Maciej Moravčík, Ondřej Pačes, Jan Nucleic Acids Res Database Issue Ancient mitochondrial DNA is used for tracing human past demographic events due to its population-level variability. The number of published ancient mitochondrial genomes has increased in recent years, alongside with the development of high-throughput sequencing and capture enrichment methods. Here, we present AmtDB, the first database of ancient human mitochondrial genomes. Release version contains 1107 hand-curated ancient samples, freely accessible for download, together with the individual descriptors, including geographic location, radiocarbon dating, and archaeological culture affiliation. The database also features an interactive map for sample location visualization. AmtDB is a key platform for ancient population genetic studies and is available at https://amtdb.org. Oxford University Press 2019-01-08 2018-09-24 /pmc/articles/PMC6324066/ /pubmed/30247677 http://dx.doi.org/10.1093/nar/gky843 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Database Issue Ehler, Edvard Novotný, Jiří Juras, Anna Chyleński, Maciej Moravčík, Ondřej Pačes, Jan AmtDB: a database of ancient human mitochondrial genomes |
title | AmtDB: a database of ancient human mitochondrial genomes |
title_full | AmtDB: a database of ancient human mitochondrial genomes |
title_fullStr | AmtDB: a database of ancient human mitochondrial genomes |
title_full_unstemmed | AmtDB: a database of ancient human mitochondrial genomes |
title_short | AmtDB: a database of ancient human mitochondrial genomes |
title_sort | amtdb: a database of ancient human mitochondrial genomes |
topic | Database Issue |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6324066/ https://www.ncbi.nlm.nih.gov/pubmed/30247677 http://dx.doi.org/10.1093/nar/gky843 |
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