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The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis

Sepsis arises from an aberrant and excessive host response to infection. Long noncoding RNAs (lncRNAs) are involved in multiple cellular functions, including inflammation and immunity. However, to date there has been no systematic attempt to identify lncRNAs whose expression is changed after the ind...

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Autores principales: Zhang, Anqiang, Lu, Hongxiang, Wen, Dalin, Sun, Jianhui, Du, Juan, Wang, Xu, Gu, Wei, Jiang, Jianxin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6325599/
https://www.ncbi.nlm.nih.gov/pubmed/30652082
http://dx.doi.org/10.1002/2211-5463.12556
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author Zhang, Anqiang
Lu, Hongxiang
Wen, Dalin
Sun, Jianhui
Du, Juan
Wang, Xu
Gu, Wei
Jiang, Jianxin
author_facet Zhang, Anqiang
Lu, Hongxiang
Wen, Dalin
Sun, Jianhui
Du, Juan
Wang, Xu
Gu, Wei
Jiang, Jianxin
author_sort Zhang, Anqiang
collection PubMed
description Sepsis arises from an aberrant and excessive host response to infection. Long noncoding RNAs (lncRNAs) are involved in multiple cellular functions, including inflammation and immunity. However, to date there has been no systematic attempt to identify lncRNAs whose expression is changed after the induction of the innate immune response. In this study, we profiled global lncRNA and mRNA expression changes in peripheral blood mononuclear cells (PBMCs) treated with lipopolysaccharide (LPS) using a microarray platform. Of the 40 914 lncRNAs screened, 596 were significantly upregulated and 250 were significantly downregulated (corrected P < 0.05) in response to LPS. Of the 34 236 mRNAs screened, 802 were upregulated and 549 were downregulated. Functional annotation analysis indicated that lncRNA‐associated differentially expressed mRNAs were primarily enriched in host immune and inflammatory responses. This study provides the first lncRNA and mRNA transcriptomic landscape of LPS‐mediated changes in human PBMCs. These findings may provide potential insights into lncRNAs involved in the immunopathology of sepsis.
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spelling pubmed-63255992019-01-16 The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis Zhang, Anqiang Lu, Hongxiang Wen, Dalin Sun, Jianhui Du, Juan Wang, Xu Gu, Wei Jiang, Jianxin FEBS Open Bio Research Articles Sepsis arises from an aberrant and excessive host response to infection. Long noncoding RNAs (lncRNAs) are involved in multiple cellular functions, including inflammation and immunity. However, to date there has been no systematic attempt to identify lncRNAs whose expression is changed after the induction of the innate immune response. In this study, we profiled global lncRNA and mRNA expression changes in peripheral blood mononuclear cells (PBMCs) treated with lipopolysaccharide (LPS) using a microarray platform. Of the 40 914 lncRNAs screened, 596 were significantly upregulated and 250 were significantly downregulated (corrected P < 0.05) in response to LPS. Of the 34 236 mRNAs screened, 802 were upregulated and 549 were downregulated. Functional annotation analysis indicated that lncRNA‐associated differentially expressed mRNAs were primarily enriched in host immune and inflammatory responses. This study provides the first lncRNA and mRNA transcriptomic landscape of LPS‐mediated changes in human PBMCs. These findings may provide potential insights into lncRNAs involved in the immunopathology of sepsis. John Wiley and Sons Inc. 2018-12-25 /pmc/articles/PMC6325599/ /pubmed/30652082 http://dx.doi.org/10.1002/2211-5463.12556 Text en © 2018 The Authors. Published by FEBS Press and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Zhang, Anqiang
Lu, Hongxiang
Wen, Dalin
Sun, Jianhui
Du, Juan
Wang, Xu
Gu, Wei
Jiang, Jianxin
The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis
title The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis
title_full The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis
title_fullStr The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis
title_full_unstemmed The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis
title_short The potential roles of long non‐coding RNAs in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis
title_sort potential roles of long non‐coding rnas in lipopolysaccharide‐induced human peripheral blood mononuclear cells as determined by microarray analysis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6325599/
https://www.ncbi.nlm.nih.gov/pubmed/30652082
http://dx.doi.org/10.1002/2211-5463.12556
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