Cargando…

Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information

This DIB article provides details about the trajectory identification and data processing algorithms used in the article “Dynamic single-vesicle tracking of cell-bound membrane vesicles on resting, activated, and cytoskeleton-disrupted cells” (Zhang et al.) [1]. The algorithm identifies vesicles on...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Ye, Zhang, Wendiao, Chen, Yong, Shan, Wenzhe
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6327075/
https://www.ncbi.nlm.nih.gov/pubmed/30671507
http://dx.doi.org/10.1016/j.dib.2018.12.076
_version_ 1783386404253859840
author Xu, Ye
Zhang, Wendiao
Chen, Yong
Shan, Wenzhe
author_facet Xu, Ye
Zhang, Wendiao
Chen, Yong
Shan, Wenzhe
author_sort Xu, Ye
collection PubMed
description This DIB article provides details about the trajectory identification and data processing algorithms used in the article “Dynamic single-vesicle tracking of cell-bound membrane vesicles on resting, activated, and cytoskeleton-disrupted cells” (Zhang et al.) [1]. The algorithm identifies vesicles on cell membranes from series of undyed grayscale images captured by the confocal microscope based on contrast differences and then trajectories of vesicles are obtained by analyzing their positions in consecutive images. Once the trajectories have been obtained, other quantitative movement information, such as moving speed, direction and acceleration, are derived by standard dynamic relations.
format Online
Article
Text
id pubmed-6327075
institution National Center for Biotechnology Information
language English
publishDate 2018
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-63270752019-01-22 Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information Xu, Ye Zhang, Wendiao Chen, Yong Shan, Wenzhe Data Brief Biochemistry, Genetics and Molecular Biology This DIB article provides details about the trajectory identification and data processing algorithms used in the article “Dynamic single-vesicle tracking of cell-bound membrane vesicles on resting, activated, and cytoskeleton-disrupted cells” (Zhang et al.) [1]. The algorithm identifies vesicles on cell membranes from series of undyed grayscale images captured by the confocal microscope based on contrast differences and then trajectories of vesicles are obtained by analyzing their positions in consecutive images. Once the trajectories have been obtained, other quantitative movement information, such as moving speed, direction and acceleration, are derived by standard dynamic relations. Elsevier 2018-12-28 /pmc/articles/PMC6327075/ /pubmed/30671507 http://dx.doi.org/10.1016/j.dib.2018.12.076 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Biochemistry, Genetics and Molecular Biology
Xu, Ye
Zhang, Wendiao
Chen, Yong
Shan, Wenzhe
Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information
title Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information
title_full Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information
title_fullStr Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information
title_full_unstemmed Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information
title_short Image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information
title_sort image and data processing algorithms for identifying cell-bound membrane vesicle trajectories and movement information
topic Biochemistry, Genetics and Molecular Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6327075/
https://www.ncbi.nlm.nih.gov/pubmed/30671507
http://dx.doi.org/10.1016/j.dib.2018.12.076
work_keys_str_mv AT xuye imageanddataprocessingalgorithmsforidentifyingcellboundmembranevesicletrajectoriesandmovementinformation
AT zhangwendiao imageanddataprocessingalgorithmsforidentifyingcellboundmembranevesicletrajectoriesandmovementinformation
AT chenyong imageanddataprocessingalgorithmsforidentifyingcellboundmembranevesicletrajectoriesandmovementinformation
AT shanwenzhe imageanddataprocessingalgorithmsforidentifyingcellboundmembranevesicletrajectoriesandmovementinformation