HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants

Heat stress transcription factors (HSFs) regulate transcriptional response to a large number of environmental influences, such as temperature fluctuations and chemical compound applications. Plant HSFs represent a large and diverse gene family. The HSF members vary substantially both in gene express...

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Detalles Bibliográficos
Autores principales: Berz, Jannik, Simm, Stefan, Schuster, Sebastian, Scharf, Klaus-Dieter, Schleiff, Enrico, Ebersberger, Ingo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2019
Materias:
Technical Advances
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6327235/
https://www.ncbi.nlm.nih.gov/pubmed/30670918
http://dx.doi.org/10.1177/1177932218821365
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author Berz, Jannik
Simm, Stefan
Schuster, Sebastian
Scharf, Klaus-Dieter
Schleiff, Enrico
Ebersberger, Ingo
author_facet Berz, Jannik
Simm, Stefan
Schuster, Sebastian
Scharf, Klaus-Dieter
Schleiff, Enrico
Ebersberger, Ingo
author_sort Berz, Jannik
collection PubMed
description Heat stress transcription factors (HSFs) regulate transcriptional response to a large number of environmental influences, such as temperature fluctuations and chemical compound applications. Plant HSFs represent a large and diverse gene family. The HSF members vary substantially both in gene expression patterns and molecular functions. HEATSTER is a web resource for mining, annotating, and analyzing members of the different classes of HSFs in plants. A web-interface allows the identification and class assignment of HSFs, intuitive searches in the database and visualization of conserved motifs, and domains to classify novel HSFs.
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spelling pubmed-63272352019-01-22 HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants Berz, Jannik Simm, Stefan Schuster, Sebastian Scharf, Klaus-Dieter Schleiff, Enrico Ebersberger, Ingo Bioinform Biol Insights Technical Advances Heat stress transcription factors (HSFs) regulate transcriptional response to a large number of environmental influences, such as temperature fluctuations and chemical compound applications. Plant HSFs represent a large and diverse gene family. The HSF members vary substantially both in gene expression patterns and molecular functions. HEATSTER is a web resource for mining, annotating, and analyzing members of the different classes of HSFs in plants. A web-interface allows the identification and class assignment of HSFs, intuitive searches in the database and visualization of conserved motifs, and domains to classify novel HSFs. SAGE Publications 2019-01-07 /pmc/articles/PMC6327235/ /pubmed/30670918 http://dx.doi.org/10.1177/1177932218821365 Text en © The Author(s) 2019 http://www.creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Technical Advances
Berz, Jannik
Simm, Stefan
Schuster, Sebastian
Scharf, Klaus-Dieter
Schleiff, Enrico
Ebersberger, Ingo
HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants
title HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants
title_full HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants
title_fullStr HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants
title_full_unstemmed HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants
title_short HEATSTER: A Database and Web Server for Identification and Classification of Heat Stress Transcription Factors in Plants
title_sort heatster: a database and web server for identification and classification of heat stress transcription factors in plants
topic Technical Advances
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6327235/
https://www.ncbi.nlm.nih.gov/pubmed/30670918
http://dx.doi.org/10.1177/1177932218821365
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