Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya

Analysis of transcriptome sequencing (RNA-Seq) data revealed a complete Cowpea aphid-borne mosaic virus (CABMV) genome from virus-infected passion fruit in Kenya. We compared it with six complete CABMV genomes, one each from Zimbabwe and Uganda and two each from Brazil and India. The Zimbabwean isol...

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Detalles Bibliográficos
Autores principales: Munguti, F., Maina, S., Nyaboga, E. N., Kilalo, D., Kimani, E., Macharia, M., Holton, T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6328679/
https://www.ncbi.nlm.nih.gov/pubmed/30643906
http://dx.doi.org/10.1128/MRA.01607-18
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author Munguti, F.
Maina, S.
Nyaboga, E. N.
Kilalo, D.
Kimani, E.
Macharia, M.
Holton, T.
author_facet Munguti, F.
Maina, S.
Nyaboga, E. N.
Kilalo, D.
Kimani, E.
Macharia, M.
Holton, T.
author_sort Munguti, F.
collection PubMed
description Analysis of transcriptome sequencing (RNA-Seq) data revealed a complete Cowpea aphid-borne mosaic virus (CABMV) genome from virus-infected passion fruit in Kenya. We compared it with six complete CABMV genomes, one each from Zimbabwe and Uganda and two each from Brazil and India. The Zimbabwean isolate CABMV-Z was the closest, with 83.0% nucleotide identity.
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spelling pubmed-63286792019-01-14 Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya Munguti, F. Maina, S. Nyaboga, E. N. Kilalo, D. Kimani, E. Macharia, M. Holton, T. Microbiol Resour Announc Genome Sequences Analysis of transcriptome sequencing (RNA-Seq) data revealed a complete Cowpea aphid-borne mosaic virus (CABMV) genome from virus-infected passion fruit in Kenya. We compared it with six complete CABMV genomes, one each from Zimbabwe and Uganda and two each from Brazil and India. The Zimbabwean isolate CABMV-Z was the closest, with 83.0% nucleotide identity. American Society for Microbiology 2019-01-10 /pmc/articles/PMC6328679/ /pubmed/30643906 http://dx.doi.org/10.1128/MRA.01607-18 Text en Copyright © 2019 Munguti et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Munguti, F.
Maina, S.
Nyaboga, E. N.
Kilalo, D.
Kimani, E.
Macharia, M.
Holton, T.
Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya
title Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya
title_full Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya
title_fullStr Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya
title_full_unstemmed Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya
title_short Transcriptome Sequencing Reveals a Complete Genome Sequence of Cowpea Aphid-Borne Mosaic Virus from Passion Fruit in Kenya
title_sort transcriptome sequencing reveals a complete genome sequence of cowpea aphid-borne mosaic virus from passion fruit in kenya
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6328679/
https://www.ncbi.nlm.nih.gov/pubmed/30643906
http://dx.doi.org/10.1128/MRA.01607-18
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