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Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes

Differentiating the contributions of photosynthesis and respiration to the global carbon cycle is critical for improving predictive climate models. Carbonic anhydrase (CA) activity in leaves is responsible for the largest biosphere-atmosphere trace gas fluxes of carbonyl sulfide (COS) and the oxygen...

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Autores principales: Meredith, Laura K., Ogée, Jérôme, Boye, Kristin, Singer, Esther, Wingate, Lisa, von Sperber, Christian, Sengupta, Aditi, Whelan, Mary, Pang, Erin, Keiluweit, Marco, Brüggemann, Nicolas, Berry, Joe A., Welander, Paula V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6330096/
https://www.ncbi.nlm.nih.gov/pubmed/30214028
http://dx.doi.org/10.1038/s41396-018-0270-2
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author Meredith, Laura K.
Ogée, Jérôme
Boye, Kristin
Singer, Esther
Wingate, Lisa
von Sperber, Christian
Sengupta, Aditi
Whelan, Mary
Pang, Erin
Keiluweit, Marco
Brüggemann, Nicolas
Berry, Joe A.
Welander, Paula V.
author_facet Meredith, Laura K.
Ogée, Jérôme
Boye, Kristin
Singer, Esther
Wingate, Lisa
von Sperber, Christian
Sengupta, Aditi
Whelan, Mary
Pang, Erin
Keiluweit, Marco
Brüggemann, Nicolas
Berry, Joe A.
Welander, Paula V.
author_sort Meredith, Laura K.
collection PubMed
description Differentiating the contributions of photosynthesis and respiration to the global carbon cycle is critical for improving predictive climate models. Carbonic anhydrase (CA) activity in leaves is responsible for the largest biosphere-atmosphere trace gas fluxes of carbonyl sulfide (COS) and the oxygen-18 isotopologue of carbon dioxide (CO(18)O) that both reflect gross photosynthetic rates. However, CA activity also occurs in soils and will be a source of uncertainty in the use of COS and CO(18)O as carbon cycle tracers until process-based constraints are improved. In this study, we measured COS and CO(18)O exchange rates and estimated the corresponding CA activity in soils from a range of biomes and land use types. Soil CA activity was not uniform for COS and CO(2), and patterns of divergence were related to microbial community composition and CA gene expression patterns. In some cases, the same microbial taxa and CA classes catalyzed both COS and CO(2) reactions in soil, but in other cases the specificity towards the two substrates differed markedly. CA activity for COS was related to fungal taxa and β-D-CA expression, whereas CA activity for CO(2) was related to algal and bacterial taxa and α-CA expression. This study integrates gas exchange measurements, enzyme activity models, and characterization of soil taxonomic and genetic diversity to build connections between CA activity and the soil microbiome. Importantly, our results identify kinetic parameters to represent soil CA activity during application of COS and CO(18)O as carbon cycle tracers.
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spelling pubmed-63300962019-01-15 Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes Meredith, Laura K. Ogée, Jérôme Boye, Kristin Singer, Esther Wingate, Lisa von Sperber, Christian Sengupta, Aditi Whelan, Mary Pang, Erin Keiluweit, Marco Brüggemann, Nicolas Berry, Joe A. Welander, Paula V. ISME J Article Differentiating the contributions of photosynthesis and respiration to the global carbon cycle is critical for improving predictive climate models. Carbonic anhydrase (CA) activity in leaves is responsible for the largest biosphere-atmosphere trace gas fluxes of carbonyl sulfide (COS) and the oxygen-18 isotopologue of carbon dioxide (CO(18)O) that both reflect gross photosynthetic rates. However, CA activity also occurs in soils and will be a source of uncertainty in the use of COS and CO(18)O as carbon cycle tracers until process-based constraints are improved. In this study, we measured COS and CO(18)O exchange rates and estimated the corresponding CA activity in soils from a range of biomes and land use types. Soil CA activity was not uniform for COS and CO(2), and patterns of divergence were related to microbial community composition and CA gene expression patterns. In some cases, the same microbial taxa and CA classes catalyzed both COS and CO(2) reactions in soil, but in other cases the specificity towards the two substrates differed markedly. CA activity for COS was related to fungal taxa and β-D-CA expression, whereas CA activity for CO(2) was related to algal and bacterial taxa and α-CA expression. This study integrates gas exchange measurements, enzyme activity models, and characterization of soil taxonomic and genetic diversity to build connections between CA activity and the soil microbiome. Importantly, our results identify kinetic parameters to represent soil CA activity during application of COS and CO(18)O as carbon cycle tracers. Nature Publishing Group UK 2018-09-13 2019-02 /pmc/articles/PMC6330096/ /pubmed/30214028 http://dx.doi.org/10.1038/s41396-018-0270-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Meredith, Laura K.
Ogée, Jérôme
Boye, Kristin
Singer, Esther
Wingate, Lisa
von Sperber, Christian
Sengupta, Aditi
Whelan, Mary
Pang, Erin
Keiluweit, Marco
Brüggemann, Nicolas
Berry, Joe A.
Welander, Paula V.
Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
title Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
title_full Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
title_fullStr Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
title_full_unstemmed Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
title_short Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
title_sort soil exchange rates of cos and co(18)o differ with the diversity of microbial communities and their carbonic anhydrase enzymes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6330096/
https://www.ncbi.nlm.nih.gov/pubmed/30214028
http://dx.doi.org/10.1038/s41396-018-0270-2
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