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Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes
Differentiating the contributions of photosynthesis and respiration to the global carbon cycle is critical for improving predictive climate models. Carbonic anhydrase (CA) activity in leaves is responsible for the largest biosphere-atmosphere trace gas fluxes of carbonyl sulfide (COS) and the oxygen...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6330096/ https://www.ncbi.nlm.nih.gov/pubmed/30214028 http://dx.doi.org/10.1038/s41396-018-0270-2 |
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author | Meredith, Laura K. Ogée, Jérôme Boye, Kristin Singer, Esther Wingate, Lisa von Sperber, Christian Sengupta, Aditi Whelan, Mary Pang, Erin Keiluweit, Marco Brüggemann, Nicolas Berry, Joe A. Welander, Paula V. |
author_facet | Meredith, Laura K. Ogée, Jérôme Boye, Kristin Singer, Esther Wingate, Lisa von Sperber, Christian Sengupta, Aditi Whelan, Mary Pang, Erin Keiluweit, Marco Brüggemann, Nicolas Berry, Joe A. Welander, Paula V. |
author_sort | Meredith, Laura K. |
collection | PubMed |
description | Differentiating the contributions of photosynthesis and respiration to the global carbon cycle is critical for improving predictive climate models. Carbonic anhydrase (CA) activity in leaves is responsible for the largest biosphere-atmosphere trace gas fluxes of carbonyl sulfide (COS) and the oxygen-18 isotopologue of carbon dioxide (CO(18)O) that both reflect gross photosynthetic rates. However, CA activity also occurs in soils and will be a source of uncertainty in the use of COS and CO(18)O as carbon cycle tracers until process-based constraints are improved. In this study, we measured COS and CO(18)O exchange rates and estimated the corresponding CA activity in soils from a range of biomes and land use types. Soil CA activity was not uniform for COS and CO(2), and patterns of divergence were related to microbial community composition and CA gene expression patterns. In some cases, the same microbial taxa and CA classes catalyzed both COS and CO(2) reactions in soil, but in other cases the specificity towards the two substrates differed markedly. CA activity for COS was related to fungal taxa and β-D-CA expression, whereas CA activity for CO(2) was related to algal and bacterial taxa and α-CA expression. This study integrates gas exchange measurements, enzyme activity models, and characterization of soil taxonomic and genetic diversity to build connections between CA activity and the soil microbiome. Importantly, our results identify kinetic parameters to represent soil CA activity during application of COS and CO(18)O as carbon cycle tracers. |
format | Online Article Text |
id | pubmed-6330096 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-63300962019-01-15 Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes Meredith, Laura K. Ogée, Jérôme Boye, Kristin Singer, Esther Wingate, Lisa von Sperber, Christian Sengupta, Aditi Whelan, Mary Pang, Erin Keiluweit, Marco Brüggemann, Nicolas Berry, Joe A. Welander, Paula V. ISME J Article Differentiating the contributions of photosynthesis and respiration to the global carbon cycle is critical for improving predictive climate models. Carbonic anhydrase (CA) activity in leaves is responsible for the largest biosphere-atmosphere trace gas fluxes of carbonyl sulfide (COS) and the oxygen-18 isotopologue of carbon dioxide (CO(18)O) that both reflect gross photosynthetic rates. However, CA activity also occurs in soils and will be a source of uncertainty in the use of COS and CO(18)O as carbon cycle tracers until process-based constraints are improved. In this study, we measured COS and CO(18)O exchange rates and estimated the corresponding CA activity in soils from a range of biomes and land use types. Soil CA activity was not uniform for COS and CO(2), and patterns of divergence were related to microbial community composition and CA gene expression patterns. In some cases, the same microbial taxa and CA classes catalyzed both COS and CO(2) reactions in soil, but in other cases the specificity towards the two substrates differed markedly. CA activity for COS was related to fungal taxa and β-D-CA expression, whereas CA activity for CO(2) was related to algal and bacterial taxa and α-CA expression. This study integrates gas exchange measurements, enzyme activity models, and characterization of soil taxonomic and genetic diversity to build connections between CA activity and the soil microbiome. Importantly, our results identify kinetic parameters to represent soil CA activity during application of COS and CO(18)O as carbon cycle tracers. Nature Publishing Group UK 2018-09-13 2019-02 /pmc/articles/PMC6330096/ /pubmed/30214028 http://dx.doi.org/10.1038/s41396-018-0270-2 Text en © The Author(s) 2018 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Meredith, Laura K. Ogée, Jérôme Boye, Kristin Singer, Esther Wingate, Lisa von Sperber, Christian Sengupta, Aditi Whelan, Mary Pang, Erin Keiluweit, Marco Brüggemann, Nicolas Berry, Joe A. Welander, Paula V. Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes |
title | Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes |
title_full | Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes |
title_fullStr | Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes |
title_full_unstemmed | Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes |
title_short | Soil exchange rates of COS and CO(18)O differ with the diversity of microbial communities and their carbonic anhydrase enzymes |
title_sort | soil exchange rates of cos and co(18)o differ with the diversity of microbial communities and their carbonic anhydrase enzymes |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6330096/ https://www.ncbi.nlm.nih.gov/pubmed/30214028 http://dx.doi.org/10.1038/s41396-018-0270-2 |
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