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Plasmodium vivax readiness to transmit: implication for malaria eradication
BACKGROUND: The lack of a continuous long-term in vitro culture system for Plasmodium vivax severely limits our knowledge of pathophysiology of the most widespread malaria parasite. To gain direct understanding of P. vivax human infections, we used Next Generation Sequencing data mining to unravel p...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6330404/ https://www.ncbi.nlm.nih.gov/pubmed/30634978 http://dx.doi.org/10.1186/s12918-018-0669-4 |
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author | Adapa, Swamy Rakesh Taylor, Rachel A. Wang, Chengqi Thomson-Luque, Richard Johnson, Leah R. Jiang, Rays H. Y. |
author_facet | Adapa, Swamy Rakesh Taylor, Rachel A. Wang, Chengqi Thomson-Luque, Richard Johnson, Leah R. Jiang, Rays H. Y. |
author_sort | Adapa, Swamy Rakesh |
collection | PubMed |
description | BACKGROUND: The lack of a continuous long-term in vitro culture system for Plasmodium vivax severely limits our knowledge of pathophysiology of the most widespread malaria parasite. To gain direct understanding of P. vivax human infections, we used Next Generation Sequencing data mining to unravel parasite in vivo expression profiles for P. vivax, and P. falciparum as comparison. RESULTS: We performed cloud and local computing to extract parasite transcriptomes from publicly available raw data of human blood samples. We developed a Poisson Modelling (PM) method to confidently identify parasite derived transcripts in mixed RNAseq signals of infected host tissues. We successfully retrieved and reconstructed parasite transcriptomes from infected patient blood as early as the first blood stage cycle; and the same methodology did not recover any significant signal from controls. Surprisingly, these first generation blood parasites already show strong signature of transmission, which indicates the commitment from asexual-to-sexual stages. Further, we place the results within the context of P. vivax’s complex life cycle, by developing mathematical models for P. vivax and P. falciparum and using sensitivity analysis assess the relative epidemiological impact of possible early stage transmission. CONCLUSION: The study uncovers the earliest onset of P. vivax blood pathogenesis and highlights the challenges of P. vivax eradication programs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12918-018-0669-4) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6330404 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-63304042019-01-16 Plasmodium vivax readiness to transmit: implication for malaria eradication Adapa, Swamy Rakesh Taylor, Rachel A. Wang, Chengqi Thomson-Luque, Richard Johnson, Leah R. Jiang, Rays H. Y. BMC Syst Biol Research Article BACKGROUND: The lack of a continuous long-term in vitro culture system for Plasmodium vivax severely limits our knowledge of pathophysiology of the most widespread malaria parasite. To gain direct understanding of P. vivax human infections, we used Next Generation Sequencing data mining to unravel parasite in vivo expression profiles for P. vivax, and P. falciparum as comparison. RESULTS: We performed cloud and local computing to extract parasite transcriptomes from publicly available raw data of human blood samples. We developed a Poisson Modelling (PM) method to confidently identify parasite derived transcripts in mixed RNAseq signals of infected host tissues. We successfully retrieved and reconstructed parasite transcriptomes from infected patient blood as early as the first blood stage cycle; and the same methodology did not recover any significant signal from controls. Surprisingly, these first generation blood parasites already show strong signature of transmission, which indicates the commitment from asexual-to-sexual stages. Further, we place the results within the context of P. vivax’s complex life cycle, by developing mathematical models for P. vivax and P. falciparum and using sensitivity analysis assess the relative epidemiological impact of possible early stage transmission. CONCLUSION: The study uncovers the earliest onset of P. vivax blood pathogenesis and highlights the challenges of P. vivax eradication programs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12918-018-0669-4) contains supplementary material, which is available to authorized users. BioMed Central 2019-01-11 /pmc/articles/PMC6330404/ /pubmed/30634978 http://dx.doi.org/10.1186/s12918-018-0669-4 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Adapa, Swamy Rakesh Taylor, Rachel A. Wang, Chengqi Thomson-Luque, Richard Johnson, Leah R. Jiang, Rays H. Y. Plasmodium vivax readiness to transmit: implication for malaria eradication |
title | Plasmodium vivax readiness to transmit: implication for malaria eradication |
title_full | Plasmodium vivax readiness to transmit: implication for malaria eradication |
title_fullStr | Plasmodium vivax readiness to transmit: implication for malaria eradication |
title_full_unstemmed | Plasmodium vivax readiness to transmit: implication for malaria eradication |
title_short | Plasmodium vivax readiness to transmit: implication for malaria eradication |
title_sort | plasmodium vivax readiness to transmit: implication for malaria eradication |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6330404/ https://www.ncbi.nlm.nih.gov/pubmed/30634978 http://dx.doi.org/10.1186/s12918-018-0669-4 |
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