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Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays

Tumor tissue mutational burden (TMB) has emerged as a promising predictive biomarker for immune checkpoint therapy. Measuring TMB from circulating tumor DNA (ctDNA) found in plasma is attractive in tissue-constrained indications. We compared the performance of two plasma-based commercial TMB assays...

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Autores principales: Qiu, Ping, Poehlein, Christian H., Marton, Matthew J., Laterza, Omar F., Levitan, Diane
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6331610/
https://www.ncbi.nlm.nih.gov/pubmed/30643180
http://dx.doi.org/10.1038/s41598-018-37128-y
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author Qiu, Ping
Poehlein, Christian H.
Marton, Matthew J.
Laterza, Omar F.
Levitan, Diane
author_facet Qiu, Ping
Poehlein, Christian H.
Marton, Matthew J.
Laterza, Omar F.
Levitan, Diane
author_sort Qiu, Ping
collection PubMed
description Tumor tissue mutational burden (TMB) has emerged as a promising predictive biomarker for immune checkpoint therapy. Measuring TMB from circulating tumor DNA (ctDNA) found in plasma is attractive in tissue-constrained indications. We compared the performance of two plasma-based commercial TMB assays including the effect of two different collection methods. Our findings suggest that the two plasma based TMB assays are highly correlated and they are also both correlated with a tissue-based TMB assay for relatively high TMB samples. The two collection methods are also found to be very comparable. Plasma-based TMB assays may be mature enough to be clinically useful in mCRPC and potentially other indications.
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spelling pubmed-63316102019-01-16 Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays Qiu, Ping Poehlein, Christian H. Marton, Matthew J. Laterza, Omar F. Levitan, Diane Sci Rep Article Tumor tissue mutational burden (TMB) has emerged as a promising predictive biomarker for immune checkpoint therapy. Measuring TMB from circulating tumor DNA (ctDNA) found in plasma is attractive in tissue-constrained indications. We compared the performance of two plasma-based commercial TMB assays including the effect of two different collection methods. Our findings suggest that the two plasma based TMB assays are highly correlated and they are also both correlated with a tissue-based TMB assay for relatively high TMB samples. The two collection methods are also found to be very comparable. Plasma-based TMB assays may be mature enough to be clinically useful in mCRPC and potentially other indications. Nature Publishing Group UK 2019-01-14 /pmc/articles/PMC6331610/ /pubmed/30643180 http://dx.doi.org/10.1038/s41598-018-37128-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Qiu, Ping
Poehlein, Christian H.
Marton, Matthew J.
Laterza, Omar F.
Levitan, Diane
Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays
title Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays
title_full Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays
title_fullStr Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays
title_full_unstemmed Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays
title_short Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays
title_sort measuring tumor mutational burden (tmb) in plasma from mcrpc patients using two commercial ngs assays
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6331610/
https://www.ncbi.nlm.nih.gov/pubmed/30643180
http://dx.doi.org/10.1038/s41598-018-37128-y
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