Cargando…

Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic

The blue land crab Cardisoma guanhumi is widely distributed throughout tropical and subtropical estuarine regions in the Western Central Atlantic (WCA). Patterns of population genetic structure and historical demographics of the species were assessed by mtDNA control region sequence analysis to exam...

Descripción completa

Detalles Bibliográficos
Autores principales: Amaral, Maria Rosimere Xavier, Albrecht, Marc, McKinley, Alan Shane, de Carvalho, Adriana Márcia Ferreira, de Sousa Junior, Severino Cavalcante, Diniz, Fabio Mendonça
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6332107/
https://www.ncbi.nlm.nih.gov/pubmed/26295384
http://dx.doi.org/10.3390/molecules200815158
_version_ 1783387272430747648
author Amaral, Maria Rosimere Xavier
Albrecht, Marc
McKinley, Alan Shane
de Carvalho, Adriana Márcia Ferreira
de Sousa Junior, Severino Cavalcante
Diniz, Fabio Mendonça
author_facet Amaral, Maria Rosimere Xavier
Albrecht, Marc
McKinley, Alan Shane
de Carvalho, Adriana Márcia Ferreira
de Sousa Junior, Severino Cavalcante
Diniz, Fabio Mendonça
author_sort Amaral, Maria Rosimere Xavier
collection PubMed
description The blue land crab Cardisoma guanhumi is widely distributed throughout tropical and subtropical estuarine regions in the Western Central Atlantic (WCA). Patterns of population genetic structure and historical demographics of the species were assessed by mtDNA control region sequence analysis to examine the connectivity among five populations (n = 97) within the region for future conservation strategies and decision-making of fishery management. A total of 234 polymorphic nucleotides were revealed within the sequence region, which have defined 93 distinct haplotypes. No dominant mtDNA haplotypes were found but instead a distribution of a few low-frequency recurrent haplotypes with a large number of singletons. A NJ-tree and a median-joining haplotype network revealed two distinct clusters, corresponding to individuals from estuaries located along the Caribbean Sea and Brazilian waters, respectively. AMOVA and F(ST) statistics supported the hypothesis that two main geographic regions exists. Phylogeographical discontinuity was further demonstrated by the Bayesian assignment analysis and a significant pattern of isolation-by-distance. Additionally, tests of neutral evolution and analysis of mismatch distribution indicate a complex demographic history in the WCA, which corresponds to bottleneck and subsequent population growth. Overall, a sharp genetic break between Caribbean and Brazilian populations raised concerns over the conservation status of the blue land crab.
format Online
Article
Text
id pubmed-6332107
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-63321072019-01-24 Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic Amaral, Maria Rosimere Xavier Albrecht, Marc McKinley, Alan Shane de Carvalho, Adriana Márcia Ferreira de Sousa Junior, Severino Cavalcante Diniz, Fabio Mendonça Molecules Article The blue land crab Cardisoma guanhumi is widely distributed throughout tropical and subtropical estuarine regions in the Western Central Atlantic (WCA). Patterns of population genetic structure and historical demographics of the species were assessed by mtDNA control region sequence analysis to examine the connectivity among five populations (n = 97) within the region for future conservation strategies and decision-making of fishery management. A total of 234 polymorphic nucleotides were revealed within the sequence region, which have defined 93 distinct haplotypes. No dominant mtDNA haplotypes were found but instead a distribution of a few low-frequency recurrent haplotypes with a large number of singletons. A NJ-tree and a median-joining haplotype network revealed two distinct clusters, corresponding to individuals from estuaries located along the Caribbean Sea and Brazilian waters, respectively. AMOVA and F(ST) statistics supported the hypothesis that two main geographic regions exists. Phylogeographical discontinuity was further demonstrated by the Bayesian assignment analysis and a significant pattern of isolation-by-distance. Additionally, tests of neutral evolution and analysis of mismatch distribution indicate a complex demographic history in the WCA, which corresponds to bottleneck and subsequent population growth. Overall, a sharp genetic break between Caribbean and Brazilian populations raised concerns over the conservation status of the blue land crab. MDPI 2015-08-19 /pmc/articles/PMC6332107/ /pubmed/26295384 http://dx.doi.org/10.3390/molecules200815158 Text en © 2015 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Amaral, Maria Rosimere Xavier
Albrecht, Marc
McKinley, Alan Shane
de Carvalho, Adriana Márcia Ferreira
de Sousa Junior, Severino Cavalcante
Diniz, Fabio Mendonça
Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic
title Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic
title_full Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic
title_fullStr Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic
title_full_unstemmed Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic
title_short Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic
title_sort mitochondrial dna variation reveals a sharp genetic break within the distribution of the blue land crab cardisoma guanhumi in the western central atlantic
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6332107/
https://www.ncbi.nlm.nih.gov/pubmed/26295384
http://dx.doi.org/10.3390/molecules200815158
work_keys_str_mv AT amaralmariarosimerexavier mitochondrialdnavariationrevealsasharpgeneticbreakwithinthedistributionofthebluelandcrabcardisomaguanhumiinthewesterncentralatlantic
AT albrechtmarc mitochondrialdnavariationrevealsasharpgeneticbreakwithinthedistributionofthebluelandcrabcardisomaguanhumiinthewesterncentralatlantic
AT mckinleyalanshane mitochondrialdnavariationrevealsasharpgeneticbreakwithinthedistributionofthebluelandcrabcardisomaguanhumiinthewesterncentralatlantic
AT decarvalhoadrianamarciaferreira mitochondrialdnavariationrevealsasharpgeneticbreakwithinthedistributionofthebluelandcrabcardisomaguanhumiinthewesterncentralatlantic
AT desousajuniorseverinocavalcante mitochondrialdnavariationrevealsasharpgeneticbreakwithinthedistributionofthebluelandcrabcardisomaguanhumiinthewesterncentralatlantic
AT dinizfabiomendonca mitochondrialdnavariationrevealsasharpgeneticbreakwithinthedistributionofthebluelandcrabcardisomaguanhumiinthewesterncentralatlantic