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Direct observation of the intermediate in an ultrafast isomerization
Using a combination of two-dimensional infrared (2D IR) and variable temperature Fourier transform infrared (FTIR) spectroscopies the rapid structural isomerization of a five-coordinate ruthenium complex is investigated. In methylene chloride, three exchanging isomers were observed: (1) square pyram...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royal Society of Chemistry
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6333165/ https://www.ncbi.nlm.nih.gov/pubmed/30713623 http://dx.doi.org/10.1039/c8sc03258k |
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author | Porter, Tyler M. Wang, Jiaxi Li, Yingmin Xiang, Bo Salsman, Catherine Miller, Joel S. Xiong, Wei Kubiak, Clifford P. |
author_facet | Porter, Tyler M. Wang, Jiaxi Li, Yingmin Xiang, Bo Salsman, Catherine Miller, Joel S. Xiong, Wei Kubiak, Clifford P. |
author_sort | Porter, Tyler M. |
collection | PubMed |
description | Using a combination of two-dimensional infrared (2D IR) and variable temperature Fourier transform infrared (FTIR) spectroscopies the rapid structural isomerization of a five-coordinate ruthenium complex is investigated. In methylene chloride, three exchanging isomers were observed: (1) square pyramidal equatorial, (1); (2) trigonal bipyramidal, (0); and (3) square pyramidal apical, (2). Exchange between 1 and 0 was found to be an endergonic process (ΔH = 0.84 (0.08) kcal mol(–1), ΔS = 0.6 (0.4) eu) with an isomerization time constant of 4.3 (1.5) picoseconds (ps, 10(–12) s). Exchange between 0 and 2 however was found to be exergonic (ΔH = –2.18 (0.06) kcal mol(–1), ΔS = –5.3 (0.3) eu) and rate limiting with an isomerization time constant of 6.3 (1.6) ps. The trigonal bipyramidal complex was found to be an intermediate, with an activation barrier of 2.2 (0.2) kcal mol(–1) and 2.4 (0.2) kcal mol(–1) relative to the equatorial and apical square pyramidal isomers respectively. This study provides direct validation of the mechanism of Berry pseudorotation – the pairwise exchange of ligands in a five-coordinate complex – a process that was first described over fifty years ago. This study also clearly demonstrates that the rate of pseudorotation approaches the frequency of molecular vibrations. |
format | Online Article Text |
id | pubmed-6333165 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-63331652019-02-01 Direct observation of the intermediate in an ultrafast isomerization Porter, Tyler M. Wang, Jiaxi Li, Yingmin Xiang, Bo Salsman, Catherine Miller, Joel S. Xiong, Wei Kubiak, Clifford P. Chem Sci Chemistry Using a combination of two-dimensional infrared (2D IR) and variable temperature Fourier transform infrared (FTIR) spectroscopies the rapid structural isomerization of a five-coordinate ruthenium complex is investigated. In methylene chloride, three exchanging isomers were observed: (1) square pyramidal equatorial, (1); (2) trigonal bipyramidal, (0); and (3) square pyramidal apical, (2). Exchange between 1 and 0 was found to be an endergonic process (ΔH = 0.84 (0.08) kcal mol(–1), ΔS = 0.6 (0.4) eu) with an isomerization time constant of 4.3 (1.5) picoseconds (ps, 10(–12) s). Exchange between 0 and 2 however was found to be exergonic (ΔH = –2.18 (0.06) kcal mol(–1), ΔS = –5.3 (0.3) eu) and rate limiting with an isomerization time constant of 6.3 (1.6) ps. The trigonal bipyramidal complex was found to be an intermediate, with an activation barrier of 2.2 (0.2) kcal mol(–1) and 2.4 (0.2) kcal mol(–1) relative to the equatorial and apical square pyramidal isomers respectively. This study provides direct validation of the mechanism of Berry pseudorotation – the pairwise exchange of ligands in a five-coordinate complex – a process that was first described over fifty years ago. This study also clearly demonstrates that the rate of pseudorotation approaches the frequency of molecular vibrations. Royal Society of Chemistry 2018-10-08 /pmc/articles/PMC6333165/ /pubmed/30713623 http://dx.doi.org/10.1039/c8sc03258k Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0) |
spellingShingle | Chemistry Porter, Tyler M. Wang, Jiaxi Li, Yingmin Xiang, Bo Salsman, Catherine Miller, Joel S. Xiong, Wei Kubiak, Clifford P. Direct observation of the intermediate in an ultrafast isomerization |
title | Direct observation of the intermediate in an ultrafast isomerization
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title_full | Direct observation of the intermediate in an ultrafast isomerization
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title_fullStr | Direct observation of the intermediate in an ultrafast isomerization
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title_full_unstemmed | Direct observation of the intermediate in an ultrafast isomerization
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title_short | Direct observation of the intermediate in an ultrafast isomerization
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title_sort | direct observation of the intermediate in an ultrafast isomerization |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6333165/ https://www.ncbi.nlm.nih.gov/pubmed/30713623 http://dx.doi.org/10.1039/c8sc03258k |
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