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Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways

Understanding the plasticity of genomes has been greatly aided by assays for recombination, repair and mutagenesis. These assays have been developed in microbial systems that provide the advantages of genetic and molecular reporters that can readily be manipulated. Cellular assays comprise genetic,...

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Autores principales: Klein, Hannah L., Bačinskaja, Giedrė, Che, Jun, Cheblal, Anais, Elango, Rajula, Epshtein, Anastasiya, Fitzgerald, Devon M., Gómez-González, Belén, Khan, Sharik R., Kumar, Sandeep, Leland, Bryan A., Marie, Léa, Mei, Qian, Miné-Hattab, Judith, Piotrowska, Alicja, Polleys, Erica J., Putnam, Christopher D., Radchenko, Elina A., Saada, Anissia Ait, Sakofsky, Cynthia J., Shim, Eun Yong, Stracy, Mathew, Xia, Jun, Yan, Zhenxin, Yin, Yi, Aguilera, Andrés, Argueso, Juan Lucas, Freudenreich, Catherine H., Gasser, Susan M., Gordenin, Dmitry A., Haber, James E., Ira, Grzegorz, Jinks-Robertson, Sue, King, Megan C., Kolodner, Richard D., Kuzminov, Andrei, Lambert, Sarah AE, Lee, Sang Eun, Miller, Kyle M., Mirkin, Sergei M., Petes, Thomas D., Rosenberg, Susan M., Rothstein, Rodney, Symington, Lorraine S., Zawadzki, Pawel, Kim, Nayun, Lisby, Michael, Malkova, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Shared Science Publishers OG 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334234/
https://www.ncbi.nlm.nih.gov/pubmed/30652105
http://dx.doi.org/10.15698/mic2019.01.664
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author Klein, Hannah L.
Bačinskaja, Giedrė
Che, Jun
Cheblal, Anais
Elango, Rajula
Epshtein, Anastasiya
Fitzgerald, Devon M.
Gómez-González, Belén
Khan, Sharik R.
Kumar, Sandeep
Leland, Bryan A.
Marie, Léa
Mei, Qian
Miné-Hattab, Judith
Piotrowska, Alicja
Polleys, Erica J.
Putnam, Christopher D.
Radchenko, Elina A.
Saada, Anissia Ait
Sakofsky, Cynthia J.
Shim, Eun Yong
Stracy, Mathew
Xia, Jun
Yan, Zhenxin
Yin, Yi
Aguilera, Andrés
Argueso, Juan Lucas
Freudenreich, Catherine H.
Gasser, Susan M.
Gordenin, Dmitry A.
Haber, James E.
Ira, Grzegorz
Jinks-Robertson, Sue
King, Megan C.
Kolodner, Richard D.
Kuzminov, Andrei
Lambert, Sarah AE
Lee, Sang Eun
Miller, Kyle M.
Mirkin, Sergei M.
Petes, Thomas D.
Rosenberg, Susan M.
Rothstein, Rodney
Symington, Lorraine S.
Zawadzki, Pawel
Kim, Nayun
Lisby, Michael
Malkova, Anna
author_facet Klein, Hannah L.
Bačinskaja, Giedrė
Che, Jun
Cheblal, Anais
Elango, Rajula
Epshtein, Anastasiya
Fitzgerald, Devon M.
Gómez-González, Belén
Khan, Sharik R.
Kumar, Sandeep
Leland, Bryan A.
Marie, Léa
Mei, Qian
Miné-Hattab, Judith
Piotrowska, Alicja
Polleys, Erica J.
Putnam, Christopher D.
Radchenko, Elina A.
Saada, Anissia Ait
Sakofsky, Cynthia J.
Shim, Eun Yong
Stracy, Mathew
Xia, Jun
Yan, Zhenxin
Yin, Yi
Aguilera, Andrés
Argueso, Juan Lucas
Freudenreich, Catherine H.
Gasser, Susan M.
Gordenin, Dmitry A.
Haber, James E.
Ira, Grzegorz
Jinks-Robertson, Sue
King, Megan C.
Kolodner, Richard D.
Kuzminov, Andrei
Lambert, Sarah AE
Lee, Sang Eun
Miller, Kyle M.
Mirkin, Sergei M.
Petes, Thomas D.
Rosenberg, Susan M.
Rothstein, Rodney
Symington, Lorraine S.
Zawadzki, Pawel
Kim, Nayun
Lisby, Michael
Malkova, Anna
author_sort Klein, Hannah L.
collection PubMed
description Understanding the plasticity of genomes has been greatly aided by assays for recombination, repair and mutagenesis. These assays have been developed in microbial systems that provide the advantages of genetic and molecular reporters that can readily be manipulated. Cellular assays comprise genetic, molecular, and cytological reporters. The assays are powerful tools but each comes with its particular advantages and limitations. Here the most commonly used assays are reviewed, discussed, and presented as the guidelines for future studies.
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spelling pubmed-63342342019-01-16 Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways Klein, Hannah L. Bačinskaja, Giedrė Che, Jun Cheblal, Anais Elango, Rajula Epshtein, Anastasiya Fitzgerald, Devon M. Gómez-González, Belén Khan, Sharik R. Kumar, Sandeep Leland, Bryan A. Marie, Léa Mei, Qian Miné-Hattab, Judith Piotrowska, Alicja Polleys, Erica J. Putnam, Christopher D. Radchenko, Elina A. Saada, Anissia Ait Sakofsky, Cynthia J. Shim, Eun Yong Stracy, Mathew Xia, Jun Yan, Zhenxin Yin, Yi Aguilera, Andrés Argueso, Juan Lucas Freudenreich, Catherine H. Gasser, Susan M. Gordenin, Dmitry A. Haber, James E. Ira, Grzegorz Jinks-Robertson, Sue King, Megan C. Kolodner, Richard D. Kuzminov, Andrei Lambert, Sarah AE Lee, Sang Eun Miller, Kyle M. Mirkin, Sergei M. Petes, Thomas D. Rosenberg, Susan M. Rothstein, Rodney Symington, Lorraine S. Zawadzki, Pawel Kim, Nayun Lisby, Michael Malkova, Anna Microb Cell Review Understanding the plasticity of genomes has been greatly aided by assays for recombination, repair and mutagenesis. These assays have been developed in microbial systems that provide the advantages of genetic and molecular reporters that can readily be manipulated. Cellular assays comprise genetic, molecular, and cytological reporters. The assays are powerful tools but each comes with its particular advantages and limitations. Here the most commonly used assays are reviewed, discussed, and presented as the guidelines for future studies. Shared Science Publishers OG 2019-01-07 /pmc/articles/PMC6334234/ /pubmed/30652105 http://dx.doi.org/10.15698/mic2019.01.664 Text en https://creativecommons.org/licenses/by/4.0/ This is an open-access article released under the terms of the Creative Commons Attribution (CC BY) license, which allows the unrestricted use, distribution, and reproduction in any medium, provided the original author and source are acknowledged.
spellingShingle Review
Klein, Hannah L.
Bačinskaja, Giedrė
Che, Jun
Cheblal, Anais
Elango, Rajula
Epshtein, Anastasiya
Fitzgerald, Devon M.
Gómez-González, Belén
Khan, Sharik R.
Kumar, Sandeep
Leland, Bryan A.
Marie, Léa
Mei, Qian
Miné-Hattab, Judith
Piotrowska, Alicja
Polleys, Erica J.
Putnam, Christopher D.
Radchenko, Elina A.
Saada, Anissia Ait
Sakofsky, Cynthia J.
Shim, Eun Yong
Stracy, Mathew
Xia, Jun
Yan, Zhenxin
Yin, Yi
Aguilera, Andrés
Argueso, Juan Lucas
Freudenreich, Catherine H.
Gasser, Susan M.
Gordenin, Dmitry A.
Haber, James E.
Ira, Grzegorz
Jinks-Robertson, Sue
King, Megan C.
Kolodner, Richard D.
Kuzminov, Andrei
Lambert, Sarah AE
Lee, Sang Eun
Miller, Kyle M.
Mirkin, Sergei M.
Petes, Thomas D.
Rosenberg, Susan M.
Rothstein, Rodney
Symington, Lorraine S.
Zawadzki, Pawel
Kim, Nayun
Lisby, Michael
Malkova, Anna
Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways
title Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways
title_full Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways
title_fullStr Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways
title_full_unstemmed Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways
title_short Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways
title_sort guidelines for dna recombination and repair studies: cellular assays of dna repair pathways
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334234/
https://www.ncbi.nlm.nih.gov/pubmed/30652105
http://dx.doi.org/10.15698/mic2019.01.664
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