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Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination

Helices are key structural features in biopolymers, enabling a variety of biological functions. Mimicking these secondary structure motifs has wide potential in the development of biomimetic materials. Peptoids, N-substituted glycine oligomers, are an important class of peptide mimics that can adopt...

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Autores principales: Baskin, Maria, Zhu, Hui, Qu, Zheng-Wang, Chill, Jordan H., Grimme, Stefan, Maayan, Galia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334629/
https://www.ncbi.nlm.nih.gov/pubmed/30713653
http://dx.doi.org/10.1039/c8sc03616k
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author Baskin, Maria
Zhu, Hui
Qu, Zheng-Wang
Chill, Jordan H.
Grimme, Stefan
Maayan, Galia
author_facet Baskin, Maria
Zhu, Hui
Qu, Zheng-Wang
Chill, Jordan H.
Grimme, Stefan
Maayan, Galia
author_sort Baskin, Maria
collection PubMed
description Helices are key structural features in biopolymers, enabling a variety of biological functions. Mimicking these secondary structure motifs has wide potential in the development of biomimetic materials. Peptoids, N-substituted glycine oligomers, are an important class of peptide mimics that can adopt polyproline type helices if the majority of their sequence consists of chiral bulky pendent groups. Such side-chains are structure inducers but they have no functional value. We present here the inclusion of several metal-binding groups in one peptoid oligomer as a new platform towards the development of functional helical peptoids. Thus, we describe the coordination of two metal ions to unstructured peptoids incorporating four 8-hydroxyquinoline (HQ) ligands at fixed positions as two (HQ, HQ) metal binding sites, and a mixture of chiral benzyl and alkyl substituents in varied positions along the peptoid backbone. For the first time, we demonstrate by circular dichroism spectroscopy, solution NMR techniques and high-level DFT calculations that some of these unstructured peptoids can fold upon metal binding to form helical structures. Replacing one HQ ligand with a terpyridine (Terpy) ligand resulted in unique sequences that can selectively coordinate Cu(2+) to the (Terpy, HQ) and Zn(2+) (or Co(2+)) to the (HQ, HQ) sites from a solution mixture containing Cu(2+) and Zn(2+) (or Co(2+)) ions. Interestingly, the binding of Cu(2+) to the (Terpy, HQ) site in one of these peptoids can initiate a conformational change that in turn facilitates the coordination of Zn(2+) (or Co(2+)) ions to the (HQ, HQ) site, demonstrating a unique example of positive allosteric cooperativity in peptide mimics.
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spelling pubmed-63346292019-02-01 Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination Baskin, Maria Zhu, Hui Qu, Zheng-Wang Chill, Jordan H. Grimme, Stefan Maayan, Galia Chem Sci Chemistry Helices are key structural features in biopolymers, enabling a variety of biological functions. Mimicking these secondary structure motifs has wide potential in the development of biomimetic materials. Peptoids, N-substituted glycine oligomers, are an important class of peptide mimics that can adopt polyproline type helices if the majority of their sequence consists of chiral bulky pendent groups. Such side-chains are structure inducers but they have no functional value. We present here the inclusion of several metal-binding groups in one peptoid oligomer as a new platform towards the development of functional helical peptoids. Thus, we describe the coordination of two metal ions to unstructured peptoids incorporating four 8-hydroxyquinoline (HQ) ligands at fixed positions as two (HQ, HQ) metal binding sites, and a mixture of chiral benzyl and alkyl substituents in varied positions along the peptoid backbone. For the first time, we demonstrate by circular dichroism spectroscopy, solution NMR techniques and high-level DFT calculations that some of these unstructured peptoids can fold upon metal binding to form helical structures. Replacing one HQ ligand with a terpyridine (Terpy) ligand resulted in unique sequences that can selectively coordinate Cu(2+) to the (Terpy, HQ) and Zn(2+) (or Co(2+)) to the (HQ, HQ) sites from a solution mixture containing Cu(2+) and Zn(2+) (or Co(2+)) ions. Interestingly, the binding of Cu(2+) to the (Terpy, HQ) site in one of these peptoids can initiate a conformational change that in turn facilitates the coordination of Zn(2+) (or Co(2+)) ions to the (HQ, HQ) site, demonstrating a unique example of positive allosteric cooperativity in peptide mimics. Royal Society of Chemistry 2018-10-17 /pmc/articles/PMC6334629/ /pubmed/30713653 http://dx.doi.org/10.1039/c8sc03616k Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0)
spellingShingle Chemistry
Baskin, Maria
Zhu, Hui
Qu, Zheng-Wang
Chill, Jordan H.
Grimme, Stefan
Maayan, Galia
Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination
title Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination
title_full Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination
title_fullStr Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination
title_full_unstemmed Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination
title_short Folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination
title_sort folding of unstructured peptoids and formation of hetero-bimetallic peptoid complexes upon side-chain-to-metal coordination
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6334629/
https://www.ncbi.nlm.nih.gov/pubmed/30713653
http://dx.doi.org/10.1039/c8sc03616k
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