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Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids
The theoretical calculation of pKa values for Brønsted acids is a challenging task that involves sophisticated and time-consuming methods. Therefore, heuristic approaches are efficient and appealing methodologies to approximate these values. Herein, we used the maximum surface electrostatic potentia...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6337188/ https://www.ncbi.nlm.nih.gov/pubmed/30587832 http://dx.doi.org/10.3390/molecules24010079 |
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author | Caballero-García, Guillermo Mondragón-Solórzano, Gustavo Torres-Cadena, Raúl Díaz-García, Marco Sandoval-Lira, Jacinto Barroso-Flores, Joaquín |
author_facet | Caballero-García, Guillermo Mondragón-Solórzano, Gustavo Torres-Cadena, Raúl Díaz-García, Marco Sandoval-Lira, Jacinto Barroso-Flores, Joaquín |
author_sort | Caballero-García, Guillermo |
collection | PubMed |
description | The theoretical calculation of pKa values for Brønsted acids is a challenging task that involves sophisticated and time-consuming methods. Therefore, heuristic approaches are efficient and appealing methodologies to approximate these values. Herein, we used the maximum surface electrostatic potential (V(S,max)) on the acidic hydrogen atoms of carboxylic acids to describe the H-bond interaction with water (the same descriptor that is used to characterize σ-bonded complexes) and correlate the results with experimental pKa values to obtain a predictive model for other carboxylic acids. We benchmarked six different methods, all including an implicit solvation model (water): Five density functionals and the Møller–Plesset second order perturbation theory in combination with six different basis sets for a total of thirty-six levels of theory. The ωB97X-D/cc-pVDZ level of theory stood out as the best one for consistently reproducing the reported pKa values, with a predictive power of 98% correlation in a test set of ten other carboxylic acids. |
format | Online Article Text |
id | pubmed-6337188 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-63371882019-01-25 Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids Caballero-García, Guillermo Mondragón-Solórzano, Gustavo Torres-Cadena, Raúl Díaz-García, Marco Sandoval-Lira, Jacinto Barroso-Flores, Joaquín Molecules Article The theoretical calculation of pKa values for Brønsted acids is a challenging task that involves sophisticated and time-consuming methods. Therefore, heuristic approaches are efficient and appealing methodologies to approximate these values. Herein, we used the maximum surface electrostatic potential (V(S,max)) on the acidic hydrogen atoms of carboxylic acids to describe the H-bond interaction with water (the same descriptor that is used to characterize σ-bonded complexes) and correlate the results with experimental pKa values to obtain a predictive model for other carboxylic acids. We benchmarked six different methods, all including an implicit solvation model (water): Five density functionals and the Møller–Plesset second order perturbation theory in combination with six different basis sets for a total of thirty-six levels of theory. The ωB97X-D/cc-pVDZ level of theory stood out as the best one for consistently reproducing the reported pKa values, with a predictive power of 98% correlation in a test set of ten other carboxylic acids. MDPI 2018-12-26 /pmc/articles/PMC6337188/ /pubmed/30587832 http://dx.doi.org/10.3390/molecules24010079 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Caballero-García, Guillermo Mondragón-Solórzano, Gustavo Torres-Cadena, Raúl Díaz-García, Marco Sandoval-Lira, Jacinto Barroso-Flores, Joaquín Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids |
title | Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids |
title_full | Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids |
title_fullStr | Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids |
title_full_unstemmed | Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids |
title_short | Calculation of V(S,max) and Its Use as a Descriptor for the Theoretical Calculation of pKa Values for Carboxylic Acids |
title_sort | calculation of v(s,max) and its use as a descriptor for the theoretical calculation of pka values for carboxylic acids |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6337188/ https://www.ncbi.nlm.nih.gov/pubmed/30587832 http://dx.doi.org/10.3390/molecules24010079 |
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