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Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients
Background: Schizophrenia is a serious mental illness affecting different regions of the brain, which causes symptoms such as hallucinations and delusions. Functional magnetic resonance imaging (fMRI) is the most popular technique to study the functional activation patterns of the brain. The fMRI da...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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F1000 Research Limited
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338245/ https://www.ncbi.nlm.nih.gov/pubmed/30687497 http://dx.doi.org/10.12688/f1000research.16405.2 |
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author | Chatterjee, Indranath |
author_facet | Chatterjee, Indranath |
author_sort | Chatterjee, Indranath |
collection | PubMed |
description | Background: Schizophrenia is a serious mental illness affecting different regions of the brain, which causes symptoms such as hallucinations and delusions. Functional magnetic resonance imaging (fMRI) is the most popular technique to study the functional activation patterns of the brain. The fMRI data is four-dimensional, composed of 3D brain images over time. Each voxel of the 3D brain volume is associated with a time series of signal intensity values. This study aimed to identify the distinct voxels from time-series fMRI data that show high functional activation during a task. Methods: In this study, a novel mean-deviation based approach was applied to time-series fMRI data of 34 schizophrenia patients and 34 healthy subjects. The statistical measures such as mean and median were used to find the functional changes in each voxel over time. The voxels that show significant changes for each subject were selected and thus used as the feature set during the classification of schizophrenia patients and healthy controls. Results: The proposed approach identifies a set of relevant voxels that are used to distinguish between healthy and schizophrenia subjects with high classification accuracy. The study shows functional changes in brain regions such as superior frontal gyrus, cuneus, medial frontal gyrus, middle occipital gyrus, and superior temporal gyrus. Conclusions: This work describes a simple yet novel feature selection algorithm for time-series fMRI data to identify the activated brain voxels that are generally affected in schizophrenia. The brain regions identified in this study may further help clinicians to understand the illness for better medical intervention. It may be possible to explore the approach to fMRI data of other psychological disorders. |
format | Online Article Text |
id | pubmed-6338245 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | F1000 Research Limited |
record_format | MEDLINE/PubMed |
spelling | pubmed-63382452019-01-24 Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients Chatterjee, Indranath F1000Res Research Article Background: Schizophrenia is a serious mental illness affecting different regions of the brain, which causes symptoms such as hallucinations and delusions. Functional magnetic resonance imaging (fMRI) is the most popular technique to study the functional activation patterns of the brain. The fMRI data is four-dimensional, composed of 3D brain images over time. Each voxel of the 3D brain volume is associated with a time series of signal intensity values. This study aimed to identify the distinct voxels from time-series fMRI data that show high functional activation during a task. Methods: In this study, a novel mean-deviation based approach was applied to time-series fMRI data of 34 schizophrenia patients and 34 healthy subjects. The statistical measures such as mean and median were used to find the functional changes in each voxel over time. The voxels that show significant changes for each subject were selected and thus used as the feature set during the classification of schizophrenia patients and healthy controls. Results: The proposed approach identifies a set of relevant voxels that are used to distinguish between healthy and schizophrenia subjects with high classification accuracy. The study shows functional changes in brain regions such as superior frontal gyrus, cuneus, medial frontal gyrus, middle occipital gyrus, and superior temporal gyrus. Conclusions: This work describes a simple yet novel feature selection algorithm for time-series fMRI data to identify the activated brain voxels that are generally affected in schizophrenia. The brain regions identified in this study may further help clinicians to understand the illness for better medical intervention. It may be possible to explore the approach to fMRI data of other psychological disorders. F1000 Research Limited 2018-12-20 /pmc/articles/PMC6338245/ /pubmed/30687497 http://dx.doi.org/10.12688/f1000research.16405.2 Text en Copyright: © 2018 Chatterjee I http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Chatterjee, Indranath Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients |
title | Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients |
title_full | Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients |
title_fullStr | Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients |
title_full_unstemmed | Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients |
title_short | Mean deviation based identification of activated voxels from time-series fMRI data of schizophrenia patients |
title_sort | mean deviation based identification of activated voxels from time-series fmri data of schizophrenia patients |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338245/ https://www.ncbi.nlm.nih.gov/pubmed/30687497 http://dx.doi.org/10.12688/f1000research.16405.2 |
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