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Chronology of motor-mediated microtubule streaming
We introduce a filament-based simulation model for coarse-grained, effective motor-mediated interaction between microtubule pairs to study the time-scales that compose cytoplasmic streaming. We characterise microtubule dynamics in two-dimensional systems by chronologically arranging five distinct pr...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338466/ https://www.ncbi.nlm.nih.gov/pubmed/30601119 http://dx.doi.org/10.7554/eLife.39694 |
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author | Ravichandran, Arvind Duman, Özer Hoore, Masoud Saggiorato, Guglielmo Vliegenthart, Gerard A Auth, Thorsten Gompper, Gerhard |
author_facet | Ravichandran, Arvind Duman, Özer Hoore, Masoud Saggiorato, Guglielmo Vliegenthart, Gerard A Auth, Thorsten Gompper, Gerhard |
author_sort | Ravichandran, Arvind |
collection | PubMed |
description | We introduce a filament-based simulation model for coarse-grained, effective motor-mediated interaction between microtubule pairs to study the time-scales that compose cytoplasmic streaming. We characterise microtubule dynamics in two-dimensional systems by chronologically arranging five distinct processes of varying duration that make up streaming, from microtubule pairs to collective dynamics. The structures found were polarity sorted due to the propulsion of antialigned microtubules. This also gave rise to the formation of large polar-aligned domains, and streaming at the domain boundaries. Correlation functions, mean squared displacements, and velocity distributions reveal a cascade of processes ultimately leading to microtubule streaming and advection, spanning multiple microtubule lengths. The characteristic times for the processes extend over three orders of magnitude from fast single-microtubule processes to slow collective processes. Our approach can be used to directly test the importance of molecular components, such as motors and crosslinking proteins between microtubules, on the collective dynamics at cellular scale. |
format | Online Article Text |
id | pubmed-6338466 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-63384662019-01-24 Chronology of motor-mediated microtubule streaming Ravichandran, Arvind Duman, Özer Hoore, Masoud Saggiorato, Guglielmo Vliegenthart, Gerard A Auth, Thorsten Gompper, Gerhard eLife Cell Biology We introduce a filament-based simulation model for coarse-grained, effective motor-mediated interaction between microtubule pairs to study the time-scales that compose cytoplasmic streaming. We characterise microtubule dynamics in two-dimensional systems by chronologically arranging five distinct processes of varying duration that make up streaming, from microtubule pairs to collective dynamics. The structures found were polarity sorted due to the propulsion of antialigned microtubules. This also gave rise to the formation of large polar-aligned domains, and streaming at the domain boundaries. Correlation functions, mean squared displacements, and velocity distributions reveal a cascade of processes ultimately leading to microtubule streaming and advection, spanning multiple microtubule lengths. The characteristic times for the processes extend over three orders of magnitude from fast single-microtubule processes to slow collective processes. Our approach can be used to directly test the importance of molecular components, such as motors and crosslinking proteins between microtubules, on the collective dynamics at cellular scale. eLife Sciences Publications, Ltd 2019-01-02 /pmc/articles/PMC6338466/ /pubmed/30601119 http://dx.doi.org/10.7554/eLife.39694 Text en © 2019, Ravichandran et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Cell Biology Ravichandran, Arvind Duman, Özer Hoore, Masoud Saggiorato, Guglielmo Vliegenthart, Gerard A Auth, Thorsten Gompper, Gerhard Chronology of motor-mediated microtubule streaming |
title | Chronology of motor-mediated microtubule streaming |
title_full | Chronology of motor-mediated microtubule streaming |
title_fullStr | Chronology of motor-mediated microtubule streaming |
title_full_unstemmed | Chronology of motor-mediated microtubule streaming |
title_short | Chronology of motor-mediated microtubule streaming |
title_sort | chronology of motor-mediated microtubule streaming |
topic | Cell Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338466/ https://www.ncbi.nlm.nih.gov/pubmed/30601119 http://dx.doi.org/10.7554/eLife.39694 |
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