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Chronology of motor-mediated microtubule streaming

We introduce a filament-based simulation model for coarse-grained, effective motor-mediated interaction between microtubule pairs to study the time-scales that compose cytoplasmic streaming. We characterise microtubule dynamics in two-dimensional systems by chronologically arranging five distinct pr...

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Detalles Bibliográficos
Autores principales: Ravichandran, Arvind, Duman, Özer, Hoore, Masoud, Saggiorato, Guglielmo, Vliegenthart, Gerard A, Auth, Thorsten, Gompper, Gerhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338466/
https://www.ncbi.nlm.nih.gov/pubmed/30601119
http://dx.doi.org/10.7554/eLife.39694
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author Ravichandran, Arvind
Duman, Özer
Hoore, Masoud
Saggiorato, Guglielmo
Vliegenthart, Gerard A
Auth, Thorsten
Gompper, Gerhard
author_facet Ravichandran, Arvind
Duman, Özer
Hoore, Masoud
Saggiorato, Guglielmo
Vliegenthart, Gerard A
Auth, Thorsten
Gompper, Gerhard
author_sort Ravichandran, Arvind
collection PubMed
description We introduce a filament-based simulation model for coarse-grained, effective motor-mediated interaction between microtubule pairs to study the time-scales that compose cytoplasmic streaming. We characterise microtubule dynamics in two-dimensional systems by chronologically arranging five distinct processes of varying duration that make up streaming, from microtubule pairs to collective dynamics. The structures found were polarity sorted due to the propulsion of antialigned microtubules. This also gave rise to the formation of large polar-aligned domains, and streaming at the domain boundaries. Correlation functions, mean squared displacements, and velocity distributions reveal a cascade of processes ultimately leading to microtubule streaming and advection, spanning multiple microtubule lengths. The characteristic times for the processes extend over three orders of magnitude from fast single-microtubule processes to slow collective processes. Our approach can be used to directly test the importance of molecular components, such as motors and crosslinking proteins between microtubules, on the collective dynamics at cellular scale.
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spelling pubmed-63384662019-01-24 Chronology of motor-mediated microtubule streaming Ravichandran, Arvind Duman, Özer Hoore, Masoud Saggiorato, Guglielmo Vliegenthart, Gerard A Auth, Thorsten Gompper, Gerhard eLife Cell Biology We introduce a filament-based simulation model for coarse-grained, effective motor-mediated interaction between microtubule pairs to study the time-scales that compose cytoplasmic streaming. We characterise microtubule dynamics in two-dimensional systems by chronologically arranging five distinct processes of varying duration that make up streaming, from microtubule pairs to collective dynamics. The structures found were polarity sorted due to the propulsion of antialigned microtubules. This also gave rise to the formation of large polar-aligned domains, and streaming at the domain boundaries. Correlation functions, mean squared displacements, and velocity distributions reveal a cascade of processes ultimately leading to microtubule streaming and advection, spanning multiple microtubule lengths. The characteristic times for the processes extend over three orders of magnitude from fast single-microtubule processes to slow collective processes. Our approach can be used to directly test the importance of molecular components, such as motors and crosslinking proteins between microtubules, on the collective dynamics at cellular scale. eLife Sciences Publications, Ltd 2019-01-02 /pmc/articles/PMC6338466/ /pubmed/30601119 http://dx.doi.org/10.7554/eLife.39694 Text en © 2019, Ravichandran et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Cell Biology
Ravichandran, Arvind
Duman, Özer
Hoore, Masoud
Saggiorato, Guglielmo
Vliegenthart, Gerard A
Auth, Thorsten
Gompper, Gerhard
Chronology of motor-mediated microtubule streaming
title Chronology of motor-mediated microtubule streaming
title_full Chronology of motor-mediated microtubule streaming
title_fullStr Chronology of motor-mediated microtubule streaming
title_full_unstemmed Chronology of motor-mediated microtubule streaming
title_short Chronology of motor-mediated microtubule streaming
title_sort chronology of motor-mediated microtubule streaming
topic Cell Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338466/
https://www.ncbi.nlm.nih.gov/pubmed/30601119
http://dx.doi.org/10.7554/eLife.39694
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