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A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States
Despite the usefulness of artificial neural networks (ANNs) in the study of various complex problems, ANNs have not been applied for modeling the geographic distribution of tuberculosis (TB) in the US. Likewise, ecological level researches on TB incidence rate at the national level are inadequate fo...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338935/ https://www.ncbi.nlm.nih.gov/pubmed/30626123 http://dx.doi.org/10.3390/ijerph16010157 |
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author | Mollalo, Abolfazl Mao, Liang Rashidi, Parisa Glass, Gregory E. |
author_facet | Mollalo, Abolfazl Mao, Liang Rashidi, Parisa Glass, Gregory E. |
author_sort | Mollalo, Abolfazl |
collection | PubMed |
description | Despite the usefulness of artificial neural networks (ANNs) in the study of various complex problems, ANNs have not been applied for modeling the geographic distribution of tuberculosis (TB) in the US. Likewise, ecological level researches on TB incidence rate at the national level are inadequate for epidemiologic inferences. We collected 278 exploratory variables including environmental and a broad range of socio-economic features for modeling the disease across the continental US. The spatial pattern of the disease distribution was statistically evaluated using the global Moran’s I, Getis–Ord General G, and local Gi* statistics. Next, we investigated the applicability of multilayer perceptron (MLP) ANN for predicting the disease incidence. To avoid overfitting, L1 regularization was used before developing the models. Predictive performance of the MLP was compared with linear regression for test dataset using root mean square error, mean absolute error, and correlations between model output and ground truth. Results of clustering analysis showed that there is a significant spatial clustering of smoothed TB incidence rate (p < 0.05) and the hotspots were mainly located in the southern and southeastern parts of the country. Among the developed models, single hidden layer MLP had the best test accuracy. Sensitivity analysis of the MLP model showed that immigrant population (proportion), underserved segments of the population, and minimum temperature were among the factors with the strongest contributions. The findings of this study can provide useful insight to health authorities on prioritizing resource allocation to risk-prone areas. |
format | Online Article Text |
id | pubmed-6338935 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-63389352019-01-23 A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States Mollalo, Abolfazl Mao, Liang Rashidi, Parisa Glass, Gregory E. Int J Environ Res Public Health Article Despite the usefulness of artificial neural networks (ANNs) in the study of various complex problems, ANNs have not been applied for modeling the geographic distribution of tuberculosis (TB) in the US. Likewise, ecological level researches on TB incidence rate at the national level are inadequate for epidemiologic inferences. We collected 278 exploratory variables including environmental and a broad range of socio-economic features for modeling the disease across the continental US. The spatial pattern of the disease distribution was statistically evaluated using the global Moran’s I, Getis–Ord General G, and local Gi* statistics. Next, we investigated the applicability of multilayer perceptron (MLP) ANN for predicting the disease incidence. To avoid overfitting, L1 regularization was used before developing the models. Predictive performance of the MLP was compared with linear regression for test dataset using root mean square error, mean absolute error, and correlations between model output and ground truth. Results of clustering analysis showed that there is a significant spatial clustering of smoothed TB incidence rate (p < 0.05) and the hotspots were mainly located in the southern and southeastern parts of the country. Among the developed models, single hidden layer MLP had the best test accuracy. Sensitivity analysis of the MLP model showed that immigrant population (proportion), underserved segments of the population, and minimum temperature were among the factors with the strongest contributions. The findings of this study can provide useful insight to health authorities on prioritizing resource allocation to risk-prone areas. MDPI 2019-01-08 2019-01 /pmc/articles/PMC6338935/ /pubmed/30626123 http://dx.doi.org/10.3390/ijerph16010157 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Mollalo, Abolfazl Mao, Liang Rashidi, Parisa Glass, Gregory E. A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States |
title | A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States |
title_full | A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States |
title_fullStr | A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States |
title_full_unstemmed | A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States |
title_short | A GIS-Based Artificial Neural Network Model for Spatial Distribution of Tuberculosis across the Continental United States |
title_sort | gis-based artificial neural network model for spatial distribution of tuberculosis across the continental united states |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6338935/ https://www.ncbi.nlm.nih.gov/pubmed/30626123 http://dx.doi.org/10.3390/ijerph16010157 |
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