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Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis
Metabolic adaptation to the host environment has been recognized as an essential mechanism of pathogenicity and the growth of Mycobacterium tuberculosis (Mtb) in the lungs for decades. The Mtb uses CO(2) as a source of carbon during the dormant or non-replicative state. However, there is a lack of b...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
De Gruyter
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6340126/ https://www.ncbi.nlm.nih.gov/pubmed/30218604 http://dx.doi.org/10.1515/jib-2017-0041 |
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author | Katiyar, Amit Singh, Harpreet Azad, Krishna Kant |
author_facet | Katiyar, Amit Singh, Harpreet Azad, Krishna Kant |
author_sort | Katiyar, Amit |
collection | PubMed |
description | Metabolic adaptation to the host environment has been recognized as an essential mechanism of pathogenicity and the growth of Mycobacterium tuberculosis (Mtb) in the lungs for decades. The Mtb uses CO(2) as a source of carbon during the dormant or non-replicative state. However, there is a lack of biochemical knowledge of its metabolic networks. In this study, we investigated the CO(2) fixation pathways (such as ko00710 and ko00720) most likely involved in the energy production and conversion of CO(2) in Mtb. Extensive pathway evaluation of 23 completely sequenced strains of Mtb confirmed the existence of a complete list of genes encoding the relevant enzymes of the reductive tricarboxylic acid (rTCA) cycle. This provides the evidence that an rTCA cycle may function to fix CO(2) in this bacterium. We also proposed that as CO(2) is plentiful in the lungs, inhibition of CO(2) fixation pathways (by targeting the relevant CO(2) fixation enzymes) could be used in the expansion of new drugs against the dormant Mtb. In support of the suggested hypothesis, the CO(2) fixation enzymes were confirmed as a potential drug target by analyzing a number of attributes necessary to be a good bacterial target. |
format | Online Article Text |
id | pubmed-6340126 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | De Gruyter |
record_format | MEDLINE/PubMed |
spelling | pubmed-63401262019-01-28 Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis Katiyar, Amit Singh, Harpreet Azad, Krishna Kant J Integr Bioinform Research Articles Metabolic adaptation to the host environment has been recognized as an essential mechanism of pathogenicity and the growth of Mycobacterium tuberculosis (Mtb) in the lungs for decades. The Mtb uses CO(2) as a source of carbon during the dormant or non-replicative state. However, there is a lack of biochemical knowledge of its metabolic networks. In this study, we investigated the CO(2) fixation pathways (such as ko00710 and ko00720) most likely involved in the energy production and conversion of CO(2) in Mtb. Extensive pathway evaluation of 23 completely sequenced strains of Mtb confirmed the existence of a complete list of genes encoding the relevant enzymes of the reductive tricarboxylic acid (rTCA) cycle. This provides the evidence that an rTCA cycle may function to fix CO(2) in this bacterium. We also proposed that as CO(2) is plentiful in the lungs, inhibition of CO(2) fixation pathways (by targeting the relevant CO(2) fixation enzymes) could be used in the expansion of new drugs against the dormant Mtb. In support of the suggested hypothesis, the CO(2) fixation enzymes were confirmed as a potential drug target by analyzing a number of attributes necessary to be a good bacterial target. De Gruyter 2018-07-03 /pmc/articles/PMC6340126/ /pubmed/30218604 http://dx.doi.org/10.1515/jib-2017-0041 Text en ©2018, Amit Katiyar et al., published by De Gruyter, Berlin/Boston http://creativecommons.org/licenses/by-nc-nd/4.0 This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License. |
spellingShingle | Research Articles Katiyar, Amit Singh, Harpreet Azad, Krishna Kant Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis |
title | Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis |
title_full | Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis |
title_fullStr | Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis |
title_full_unstemmed | Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis |
title_short | Identification of Missing Carbon Fixation Enzymes as Potential Drug Targets in Mycobacterium Tuberculosis |
title_sort | identification of missing carbon fixation enzymes as potential drug targets in mycobacterium tuberculosis |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6340126/ https://www.ncbi.nlm.nih.gov/pubmed/30218604 http://dx.doi.org/10.1515/jib-2017-0041 |
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