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Biodiversity of fungi in hot desert sands

The fungal community of six sand samples from Saudi Arabia and Jordan deserts was characterized by culture‐independent analysis via next generation sequencing of the 18S rRNA genes and by culture‐dependent methods followed by sequencing of internal transcribed spacer (ITS) region. By 18S sequencing...

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Autores principales: Murgia, Manuela, Fiamma, Maura, Barac, Aleksandra, Deligios, Massimo, Mazzarello, Vittorio, Paglietti, Bianca, Cappuccinelli, Pietro, Al‐Qahtani, Ahmed, Squartini, Andrea, Rubino, Salvatore, Al‐Ahdal, Mohammed N.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6341031/
https://www.ncbi.nlm.nih.gov/pubmed/29504263
http://dx.doi.org/10.1002/mbo3.595
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author Murgia, Manuela
Fiamma, Maura
Barac, Aleksandra
Deligios, Massimo
Mazzarello, Vittorio
Paglietti, Bianca
Cappuccinelli, Pietro
Al‐Qahtani, Ahmed
Squartini, Andrea
Rubino, Salvatore
Al‐Ahdal, Mohammed N.
author_facet Murgia, Manuela
Fiamma, Maura
Barac, Aleksandra
Deligios, Massimo
Mazzarello, Vittorio
Paglietti, Bianca
Cappuccinelli, Pietro
Al‐Qahtani, Ahmed
Squartini, Andrea
Rubino, Salvatore
Al‐Ahdal, Mohammed N.
author_sort Murgia, Manuela
collection PubMed
description The fungal community of six sand samples from Saudi Arabia and Jordan deserts was characterized by culture‐independent analysis via next generation sequencing of the 18S rRNA genes and by culture‐dependent methods followed by sequencing of internal transcribed spacer (ITS) region. By 18S sequencing were identified from 163 to 507 OTUs per sample, with a percentage of fungi ranging from 3.5% to 82.7%. The identified fungal Phyla were Ascomycota, Basal fungi, and Basidiomycota and the most abundant detected classes were Dothideomycetes, Pezizomycetes, and Sordariomycetes. A total of 11 colonies of filamentous fungi were isolated and cultured from six samples, and the ITS sequencing pointed toward five different species of the class Sordariomycetes, belonging to genera Fusarium (F. redolens, F. solani, F. equiseti), Chaetomium (C. madrasense), and Albifimbria (A. terrestris). The results of this study show an unexpectedly large fungal biodiversity in the Middle East desert sand and their possible role and implications on human health.
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spelling pubmed-63410312019-01-24 Biodiversity of fungi in hot desert sands Murgia, Manuela Fiamma, Maura Barac, Aleksandra Deligios, Massimo Mazzarello, Vittorio Paglietti, Bianca Cappuccinelli, Pietro Al‐Qahtani, Ahmed Squartini, Andrea Rubino, Salvatore Al‐Ahdal, Mohammed N. Microbiologyopen Original Research The fungal community of six sand samples from Saudi Arabia and Jordan deserts was characterized by culture‐independent analysis via next generation sequencing of the 18S rRNA genes and by culture‐dependent methods followed by sequencing of internal transcribed spacer (ITS) region. By 18S sequencing were identified from 163 to 507 OTUs per sample, with a percentage of fungi ranging from 3.5% to 82.7%. The identified fungal Phyla were Ascomycota, Basal fungi, and Basidiomycota and the most abundant detected classes were Dothideomycetes, Pezizomycetes, and Sordariomycetes. A total of 11 colonies of filamentous fungi were isolated and cultured from six samples, and the ITS sequencing pointed toward five different species of the class Sordariomycetes, belonging to genera Fusarium (F. redolens, F. solani, F. equiseti), Chaetomium (C. madrasense), and Albifimbria (A. terrestris). The results of this study show an unexpectedly large fungal biodiversity in the Middle East desert sand and their possible role and implications on human health. John Wiley and Sons Inc. 2018-03-05 /pmc/articles/PMC6341031/ /pubmed/29504263 http://dx.doi.org/10.1002/mbo3.595 Text en © 2018 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Murgia, Manuela
Fiamma, Maura
Barac, Aleksandra
Deligios, Massimo
Mazzarello, Vittorio
Paglietti, Bianca
Cappuccinelli, Pietro
Al‐Qahtani, Ahmed
Squartini, Andrea
Rubino, Salvatore
Al‐Ahdal, Mohammed N.
Biodiversity of fungi in hot desert sands
title Biodiversity of fungi in hot desert sands
title_full Biodiversity of fungi in hot desert sands
title_fullStr Biodiversity of fungi in hot desert sands
title_full_unstemmed Biodiversity of fungi in hot desert sands
title_short Biodiversity of fungi in hot desert sands
title_sort biodiversity of fungi in hot desert sands
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6341031/
https://www.ncbi.nlm.nih.gov/pubmed/29504263
http://dx.doi.org/10.1002/mbo3.595
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