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Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing
PREMISE OF THE STUDY: Microsatellite markers were developed for Primula sinolisteri, a perennial distylous herb belonging to section Obconicolisteri (Primulaceae), to facilitate future investigations of the population genetics and mating patterns of populations in this species. METHODS AND RESULTS:...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342175/ https://www.ncbi.nlm.nih.gov/pubmed/30693154 http://dx.doi.org/10.1002/aps3.1208 |
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author | Wang, Xinjia Zhong, Li Wu, Zhikun Sun, Huaying Wang, Hong Li, Dezhu Barrett, Spencer C. H. Zhou, Wei |
author_facet | Wang, Xinjia Zhong, Li Wu, Zhikun Sun, Huaying Wang, Hong Li, Dezhu Barrett, Spencer C. H. Zhou, Wei |
author_sort | Wang, Xinjia |
collection | PubMed |
description | PREMISE OF THE STUDY: Microsatellite markers were developed for Primula sinolisteri, a perennial distylous herb belonging to section Obconicolisteri (Primulaceae), to facilitate future investigations of the population genetics and mating patterns of populations in this species. METHODS AND RESULTS: We developed 30 microsatellite markers for P. sinolisteri using HiSeq X‐Ten sequencing and measured polymorphism and genetic diversity in a sample of 36 individuals from three natural populations. The markers displayed relatively high polymorphism, with the number of observed alleles per locus ranging from one to 19 (mean = 4.42). The observed and expected heterozygosity ranged from 0–1.000 and 0.083–0.882, respectively. Twenty‐nine of the loci were also successfully amplified in homostylous P. sinolisteri var. aspera. CONCLUSIONS: The microsatellite markers we have identified in P. sinolisteri provide powerful tools for investigating patterns of population genetic diversity and the evolutionary relationships between heterostyly and homostyly in this species. |
format | Online Article Text |
id | pubmed-6342175 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-63421752019-01-28 Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing Wang, Xinjia Zhong, Li Wu, Zhikun Sun, Huaying Wang, Hong Li, Dezhu Barrett, Spencer C. H. Zhou, Wei Appl Plant Sci Primer Notes PREMISE OF THE STUDY: Microsatellite markers were developed for Primula sinolisteri, a perennial distylous herb belonging to section Obconicolisteri (Primulaceae), to facilitate future investigations of the population genetics and mating patterns of populations in this species. METHODS AND RESULTS: We developed 30 microsatellite markers for P. sinolisteri using HiSeq X‐Ten sequencing and measured polymorphism and genetic diversity in a sample of 36 individuals from three natural populations. The markers displayed relatively high polymorphism, with the number of observed alleles per locus ranging from one to 19 (mean = 4.42). The observed and expected heterozygosity ranged from 0–1.000 and 0.083–0.882, respectively. Twenty‐nine of the loci were also successfully amplified in homostylous P. sinolisteri var. aspera. CONCLUSIONS: The microsatellite markers we have identified in P. sinolisteri provide powerful tools for investigating patterns of population genetic diversity and the evolutionary relationships between heterostyly and homostyly in this species. John Wiley and Sons Inc. 2019-01-03 /pmc/articles/PMC6342175/ /pubmed/30693154 http://dx.doi.org/10.1002/aps3.1208 Text en © 2019 Wang et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Primer Notes Wang, Xinjia Zhong, Li Wu, Zhikun Sun, Huaying Wang, Hong Li, Dezhu Barrett, Spencer C. H. Zhou, Wei Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing |
title | Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing |
title_full | Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing |
title_fullStr | Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing |
title_full_unstemmed | Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing |
title_short | Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing |
title_sort | characterization of 30 microsatellite markers in distylous primula sinolisteri (primulaceae) using hiseq sequencing |
topic | Primer Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342175/ https://www.ncbi.nlm.nih.gov/pubmed/30693154 http://dx.doi.org/10.1002/aps3.1208 |
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