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Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing

PREMISE OF THE STUDY: Microsatellite markers were developed for Primula sinolisteri, a perennial distylous herb belonging to section Obconicolisteri (Primulaceae), to facilitate future investigations of the population genetics and mating patterns of populations in this species. METHODS AND RESULTS:...

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Detalles Bibliográficos
Autores principales: Wang, Xinjia, Zhong, Li, Wu, Zhikun, Sun, Huaying, Wang, Hong, Li, Dezhu, Barrett, Spencer C. H., Zhou, Wei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342175/
https://www.ncbi.nlm.nih.gov/pubmed/30693154
http://dx.doi.org/10.1002/aps3.1208
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author Wang, Xinjia
Zhong, Li
Wu, Zhikun
Sun, Huaying
Wang, Hong
Li, Dezhu
Barrett, Spencer C. H.
Zhou, Wei
author_facet Wang, Xinjia
Zhong, Li
Wu, Zhikun
Sun, Huaying
Wang, Hong
Li, Dezhu
Barrett, Spencer C. H.
Zhou, Wei
author_sort Wang, Xinjia
collection PubMed
description PREMISE OF THE STUDY: Microsatellite markers were developed for Primula sinolisteri, a perennial distylous herb belonging to section Obconicolisteri (Primulaceae), to facilitate future investigations of the population genetics and mating patterns of populations in this species. METHODS AND RESULTS: We developed 30 microsatellite markers for P. sinolisteri using HiSeq X‐Ten sequencing and measured polymorphism and genetic diversity in a sample of 36 individuals from three natural populations. The markers displayed relatively high polymorphism, with the number of observed alleles per locus ranging from one to 19 (mean = 4.42). The observed and expected heterozygosity ranged from 0–1.000 and 0.083–0.882, respectively. Twenty‐nine of the loci were also successfully amplified in homostylous P. sinolisteri var. aspera. CONCLUSIONS: The microsatellite markers we have identified in P. sinolisteri provide powerful tools for investigating patterns of population genetic diversity and the evolutionary relationships between heterostyly and homostyly in this species.
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spelling pubmed-63421752019-01-28 Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing Wang, Xinjia Zhong, Li Wu, Zhikun Sun, Huaying Wang, Hong Li, Dezhu Barrett, Spencer C. H. Zhou, Wei Appl Plant Sci Primer Notes PREMISE OF THE STUDY: Microsatellite markers were developed for Primula sinolisteri, a perennial distylous herb belonging to section Obconicolisteri (Primulaceae), to facilitate future investigations of the population genetics and mating patterns of populations in this species. METHODS AND RESULTS: We developed 30 microsatellite markers for P. sinolisteri using HiSeq X‐Ten sequencing and measured polymorphism and genetic diversity in a sample of 36 individuals from three natural populations. The markers displayed relatively high polymorphism, with the number of observed alleles per locus ranging from one to 19 (mean = 4.42). The observed and expected heterozygosity ranged from 0–1.000 and 0.083–0.882, respectively. Twenty‐nine of the loci were also successfully amplified in homostylous P. sinolisteri var. aspera. CONCLUSIONS: The microsatellite markers we have identified in P. sinolisteri provide powerful tools for investigating patterns of population genetic diversity and the evolutionary relationships between heterostyly and homostyly in this species. John Wiley and Sons Inc. 2019-01-03 /pmc/articles/PMC6342175/ /pubmed/30693154 http://dx.doi.org/10.1002/aps3.1208 Text en © 2019 Wang et al. Applications in Plant Sciences is published by Wiley Periodicals, Inc. on behalf of the Botanical Society of America This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Primer Notes
Wang, Xinjia
Zhong, Li
Wu, Zhikun
Sun, Huaying
Wang, Hong
Li, Dezhu
Barrett, Spencer C. H.
Zhou, Wei
Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing
title Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing
title_full Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing
title_fullStr Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing
title_full_unstemmed Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing
title_short Characterization of 30 microsatellite markers in distylous Primula sinolisteri (Primulaceae) using HiSeq sequencing
title_sort characterization of 30 microsatellite markers in distylous primula sinolisteri (primulaceae) using hiseq sequencing
topic Primer Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342175/
https://www.ncbi.nlm.nih.gov/pubmed/30693154
http://dx.doi.org/10.1002/aps3.1208
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