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Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons

Cellular heterogeneity within the mammalian brain poses a challenge toward understanding its complex functions. Within the olfactory bulb, odor information is processed by subtypes of inhibitory interneurons whose heterogeneity and functionality are influenced by ongoing adult neurogenesis. To inves...

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Detalles Bibliográficos
Autores principales: Tepe, Burak, Hill, Matthew C., Pekarek, Brandon T., Hunt, Patrick J., Martin, Thomas J., Martin, James F., Arenkiel, Benjamin R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342206/
https://www.ncbi.nlm.nih.gov/pubmed/30517858
http://dx.doi.org/10.1016/j.celrep.2018.11.034
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author Tepe, Burak
Hill, Matthew C.
Pekarek, Brandon T.
Hunt, Patrick J.
Martin, Thomas J.
Martin, James F.
Arenkiel, Benjamin R.
author_facet Tepe, Burak
Hill, Matthew C.
Pekarek, Brandon T.
Hunt, Patrick J.
Martin, Thomas J.
Martin, James F.
Arenkiel, Benjamin R.
author_sort Tepe, Burak
collection PubMed
description Cellular heterogeneity within the mammalian brain poses a challenge toward understanding its complex functions. Within the olfactory bulb, odor information is processed by subtypes of inhibitory interneurons whose heterogeneity and functionality are influenced by ongoing adult neurogenesis. To investigate this cellular heterogeneity and better understand adult-born neuron development, we utilized single-cell RNA sequencing and computational modeling to reveal diverse and transcriptionally distinct neuronal and nonneuronal cell types. We also analyzed molecular changes during adult-born interneuron maturation and uncovered developmental programs within their gene expression profiles. Finally, we identified that distinct neuronal subtypes are differentially affected by sensory experience. Together, these data provide a transcriptome-based foundation for investigating subtype-specific neuronal function in the olfactory bulb (OB), charting the molecular profiles that arise during the maturation and integration of adult-born neurons and how they dynamically change in an activity-dependent manner.
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spelling pubmed-63422062019-01-22 Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons Tepe, Burak Hill, Matthew C. Pekarek, Brandon T. Hunt, Patrick J. Martin, Thomas J. Martin, James F. Arenkiel, Benjamin R. Cell Rep Article Cellular heterogeneity within the mammalian brain poses a challenge toward understanding its complex functions. Within the olfactory bulb, odor information is processed by subtypes of inhibitory interneurons whose heterogeneity and functionality are influenced by ongoing adult neurogenesis. To investigate this cellular heterogeneity and better understand adult-born neuron development, we utilized single-cell RNA sequencing and computational modeling to reveal diverse and transcriptionally distinct neuronal and nonneuronal cell types. We also analyzed molecular changes during adult-born interneuron maturation and uncovered developmental programs within their gene expression profiles. Finally, we identified that distinct neuronal subtypes are differentially affected by sensory experience. Together, these data provide a transcriptome-based foundation for investigating subtype-specific neuronal function in the olfactory bulb (OB), charting the molecular profiles that arise during the maturation and integration of adult-born neurons and how they dynamically change in an activity-dependent manner. 2018-12-04 /pmc/articles/PMC6342206/ /pubmed/30517858 http://dx.doi.org/10.1016/j.celrep.2018.11.034 Text en This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Tepe, Burak
Hill, Matthew C.
Pekarek, Brandon T.
Hunt, Patrick J.
Martin, Thomas J.
Martin, James F.
Arenkiel, Benjamin R.
Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons
title Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons
title_full Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons
title_fullStr Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons
title_full_unstemmed Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons
title_short Single-Cell RNA-Seq of Mouse Olfactory Bulb Reveals Cellular Heterogeneity and Activity-Dependent Molecular Census of Adult-Born Neurons
title_sort single-cell rna-seq of mouse olfactory bulb reveals cellular heterogeneity and activity-dependent molecular census of adult-born neurons
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342206/
https://www.ncbi.nlm.nih.gov/pubmed/30517858
http://dx.doi.org/10.1016/j.celrep.2018.11.034
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