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Using the drug-protein interactome to identify anti-ageing compounds for humans
Advancing age is the dominant risk factor for most of the major killer diseases in developed countries. Hence, ameliorating the effects of ageing may prevent multiple diseases simultaneously. Drugs licensed for human use against specific diseases have proved to be effective in extending lifespan and...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342327/ https://www.ncbi.nlm.nih.gov/pubmed/30625143 http://dx.doi.org/10.1371/journal.pcbi.1006639 |
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author | Fuentealba, Matías Dönertaş, Handan Melike Williams, Rhianna Labbadia, Johnathan Thornton, Janet M. Partridge, Linda |
author_facet | Fuentealba, Matías Dönertaş, Handan Melike Williams, Rhianna Labbadia, Johnathan Thornton, Janet M. Partridge, Linda |
author_sort | Fuentealba, Matías |
collection | PubMed |
description | Advancing age is the dominant risk factor for most of the major killer diseases in developed countries. Hence, ameliorating the effects of ageing may prevent multiple diseases simultaneously. Drugs licensed for human use against specific diseases have proved to be effective in extending lifespan and healthspan in animal models, suggesting that there is scope for drug repurposing in humans. New bioinformatic methods to identify and prioritise potential anti-ageing compounds for humans are therefore of interest. In this study, we first used drug-protein interaction information, to rank 1,147 drugs by their likelihood of targeting ageing-related gene products in humans. Among 19 statistically significant drugs, 6 have already been shown to have pro-longevity properties in animal models (p < 0.001). Using the targets of each drug, we established their association with ageing at multiple levels of biological action including pathways, functions and protein interactions. Finally, combining all the data, we calculated a ranked list of drugs that identified tanespimycin, an inhibitor of HSP-90, as the top-ranked novel anti-ageing candidate. We experimentally validated the pro-longevity effect of tanespimycin through its HSP-90 target in Caenorhabditis elegans. |
format | Online Article Text |
id | pubmed-6342327 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-63423272019-02-01 Using the drug-protein interactome to identify anti-ageing compounds for humans Fuentealba, Matías Dönertaş, Handan Melike Williams, Rhianna Labbadia, Johnathan Thornton, Janet M. Partridge, Linda PLoS Comput Biol Research Article Advancing age is the dominant risk factor for most of the major killer diseases in developed countries. Hence, ameliorating the effects of ageing may prevent multiple diseases simultaneously. Drugs licensed for human use against specific diseases have proved to be effective in extending lifespan and healthspan in animal models, suggesting that there is scope for drug repurposing in humans. New bioinformatic methods to identify and prioritise potential anti-ageing compounds for humans are therefore of interest. In this study, we first used drug-protein interaction information, to rank 1,147 drugs by their likelihood of targeting ageing-related gene products in humans. Among 19 statistically significant drugs, 6 have already been shown to have pro-longevity properties in animal models (p < 0.001). Using the targets of each drug, we established their association with ageing at multiple levels of biological action including pathways, functions and protein interactions. Finally, combining all the data, we calculated a ranked list of drugs that identified tanespimycin, an inhibitor of HSP-90, as the top-ranked novel anti-ageing candidate. We experimentally validated the pro-longevity effect of tanespimycin through its HSP-90 target in Caenorhabditis elegans. Public Library of Science 2019-01-09 /pmc/articles/PMC6342327/ /pubmed/30625143 http://dx.doi.org/10.1371/journal.pcbi.1006639 Text en © 2019 Fuentealba et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Fuentealba, Matías Dönertaş, Handan Melike Williams, Rhianna Labbadia, Johnathan Thornton, Janet M. Partridge, Linda Using the drug-protein interactome to identify anti-ageing compounds for humans |
title | Using the drug-protein interactome to identify anti-ageing compounds for humans |
title_full | Using the drug-protein interactome to identify anti-ageing compounds for humans |
title_fullStr | Using the drug-protein interactome to identify anti-ageing compounds for humans |
title_full_unstemmed | Using the drug-protein interactome to identify anti-ageing compounds for humans |
title_short | Using the drug-protein interactome to identify anti-ageing compounds for humans |
title_sort | using the drug-protein interactome to identify anti-ageing compounds for humans |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6342327/ https://www.ncbi.nlm.nih.gov/pubmed/30625143 http://dx.doi.org/10.1371/journal.pcbi.1006639 |
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