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Multi-locus phylogeny and taxonomy of Exserohilum
Exserohilum includes a number of plant pathogenic, saprobic and clinically relevant fungi. Some of these species are of great importance in human activities, but the genus has never been revised in a phylogenetic framework. In this study, we revise Exserohilum based on available ex-type cultures fro...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6344813/ https://www.ncbi.nlm.nih.gov/pubmed/30728600 http://dx.doi.org/10.3767/persoonia.2018.41.05 |
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author | Hernández-Restrepo, M. Madrid, H. Tan, Y.P. da Cunha, K.C. Gené, J. Guarro, J. Crous, P.W. |
author_facet | Hernández-Restrepo, M. Madrid, H. Tan, Y.P. da Cunha, K.C. Gené, J. Guarro, J. Crous, P.W. |
author_sort | Hernández-Restrepo, M. |
collection | PubMed |
description | Exserohilum includes a number of plant pathogenic, saprobic and clinically relevant fungi. Some of these species are of great importance in human activities, but the genus has never been revised in a phylogenetic framework. In this study, we revise Exserohilum based on available ex-type cultures from worldwide collections, observation of the holotypes and/or protologues, and additional isolates from diverse substrates and geographical origins. Based on nine nuclear loci, i.e., ITS, LSU, act, tub2, cam, gapdh, his, tef1 and rpb2, as well as phenotypic data, the genus and species boundaries are assessed for Exserohilum. Three species, i.e., E. novae-zelandiae, E. paspali and E. sorghicola, are excluded from the genus and reallocated in Sporidesmiella and Curvularia, respectively, whereas E. heteropogonicola and E. inaequale are confirmed as members of Curvularia. Exserohilum rostratum is revealed as conspecific with species previously described in Exserohilum such as E. antillanum, E. gedarefense, E. leptochloae, E. longirostratum, E. macginnisii and E. prolatum. Additionally, E. curvatum is revealed as synonym of E. holmii, and E. fusiforme of E. oryzicola. A total of 11 Exserohilum phylogenetic species are described, illustrated and discussed, including one novel taxon, E. corniculatum. The placements of 15 other doubtful species are discussed, and E. elongatum is validated. |
format | Online Article Text |
id | pubmed-6344813 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures |
record_format | MEDLINE/PubMed |
spelling | pubmed-63448132019-02-06 Multi-locus phylogeny and taxonomy of Exserohilum Hernández-Restrepo, M. Madrid, H. Tan, Y.P. da Cunha, K.C. Gené, J. Guarro, J. Crous, P.W. Persoonia Research Article Exserohilum includes a number of plant pathogenic, saprobic and clinically relevant fungi. Some of these species are of great importance in human activities, but the genus has never been revised in a phylogenetic framework. In this study, we revise Exserohilum based on available ex-type cultures from worldwide collections, observation of the holotypes and/or protologues, and additional isolates from diverse substrates and geographical origins. Based on nine nuclear loci, i.e., ITS, LSU, act, tub2, cam, gapdh, his, tef1 and rpb2, as well as phenotypic data, the genus and species boundaries are assessed for Exserohilum. Three species, i.e., E. novae-zelandiae, E. paspali and E. sorghicola, are excluded from the genus and reallocated in Sporidesmiella and Curvularia, respectively, whereas E. heteropogonicola and E. inaequale are confirmed as members of Curvularia. Exserohilum rostratum is revealed as conspecific with species previously described in Exserohilum such as E. antillanum, E. gedarefense, E. leptochloae, E. longirostratum, E. macginnisii and E. prolatum. Additionally, E. curvatum is revealed as synonym of E. holmii, and E. fusiforme of E. oryzicola. A total of 11 Exserohilum phylogenetic species are described, illustrated and discussed, including one novel taxon, E. corniculatum. The placements of 15 other doubtful species are discussed, and E. elongatum is validated. Nationaal Herbarium Nederland & Centraallbureau voor Schimmelcultures 2018-03-13 2018-12 /pmc/articles/PMC6344813/ /pubmed/30728600 http://dx.doi.org/10.3767/persoonia.2018.41.05 Text en © 2018 Naturalis Biodiversity Center & Westerdijk Fungal Biodiversity Institute http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode You are free to share - to copy, distribute and transmit the work, under the following conditions: Attribution: You must attribute the work in the manner specified by the author or licensor (but not in any way that suggests that they endorse you or your use of the work). Non-commercial: You may not use this work for commercial purposes. No derivative works: You may not alter, transform, or build upon this work. For any reuse or distribution, you must make clear to others the license terms of this work, which can be found at http://creativecommons.org/licenses/by-nc-nd/3.0/legalcode. Any of the above conditions can be waived if you get permission from the copyright holder. Nothing in this license impairs or restricts the author’s moral rights. |
spellingShingle | Research Article Hernández-Restrepo, M. Madrid, H. Tan, Y.P. da Cunha, K.C. Gené, J. Guarro, J. Crous, P.W. Multi-locus phylogeny and taxonomy of Exserohilum |
title | Multi-locus phylogeny and taxonomy of Exserohilum |
title_full | Multi-locus phylogeny and taxonomy of Exserohilum |
title_fullStr | Multi-locus phylogeny and taxonomy of Exserohilum |
title_full_unstemmed | Multi-locus phylogeny and taxonomy of Exserohilum |
title_short | Multi-locus phylogeny and taxonomy of Exserohilum |
title_sort | multi-locus phylogeny and taxonomy of exserohilum |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6344813/ https://www.ncbi.nlm.nih.gov/pubmed/30728600 http://dx.doi.org/10.3767/persoonia.2018.41.05 |
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