Cargando…

A Novel Protein Subcellular Localization Method With CNN-XGBoost Model for Alzheimer's Disease

The disorder distribution of protein in the compartment or organelle leads to many human diseases, including neurodegenerative diseases such as Alzheimer's disease. The prediction of protein subcellular localization play important roles in the understanding of the mechanism of protein function,...

Descripción completa

Detalles Bibliográficos
Autores principales:	Pang, Long, Wang, Junjie, Zhao, Lingling, Wang, Chunyu, Zhan, Hui
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2019
Materias:	Genetics
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6345701/ https://www.ncbi.nlm.nih.gov/pubmed/30713552 http://dx.doi.org/10.3389/fgene.2018.00751

Ejemplares similares

A Deep Learning and XGBoost-Based Method for Predicting Protein-Protein Interaction Sites
por: Wang, Pan, et al.
Publicado: (2021)

A Novel XGBoost Method to Identify Cancer Tissue-of-Origin Based on Copy Number Variations
por: Zhang, Yulin, et al.
Publicado: (2020)

An improvement of the CNN-XGboost model for pneumonia disease classification
por: Hedhoud, Yousra, et al.
Publicado: (2023)

A Novel XGBoost Method to Infer the Primary Lesion of 20 Solid Tumor Types From Gene Expression Data
por: Chen, Sijie, et al.
Publicado: (2021)

Path-ATT-CNN: A Novel Deep Neural Network Method for Key Pathway Identification of Lung Cancer
por: Yuan, Lin, et al.
Publicado: (2022)

Identification of Protein Subcellular Localization With Network and Functional Embeddings
por: Pan, Xiaoyong, et al.
Publicado: (2021)

Identification of Cancer-Related Long Non-Coding RNAs Using XGBoost With High Accuracy
por: Zhang, Xuan, et al.
Publicado: (2019)

VTP-Identifier: Vesicular Transport Proteins Identification Based on PSSM Profiles and XGBoost
por: Gong, Yue, et al.
Publicado: (2022)

Gene Expression Value Prediction Based on XGBoost Algorithm
por: Li, Wei, et al.
Publicado: (2019)

XGEM: Predicting Essential miRNAs by the Ensembles of Various Sequence-Based Classifiers With XGBoost Algorithm
por: Min, Hui, et al.
Publicado: (2022)

m5Cpred-XS: A New Method for Predicting RNA m5C Sites Based on XGBoost and SHAP
por: Liu, Yinbo, et al.
Publicado: (2022)

The Role of Alternative Polyadenylation in the Regulation of Subcellular RNA Localization
por: Arora, Ankita, et al.
Publicado: (2022)

Prediction of the tetramer protein complex interaction based on CNN and SVM
por: Lyu, Yanfen, et al.
Publicado: (2023)

Tools for the Recognition of Sorting Signals and the Prediction of Subcellular Localization of Proteins From Their Amino Acid Sequences
por: Imai, Kenichiro, et al.
Publicado: (2020)

Gm-PLoc: A Subcellular Localization Model of Multi-Label Protein Based on GAN and DeepFM
por: Wu, Liwen, et al.
Publicado: (2022)

Five-Feature Model for Developing the Classifier for Synergistic vs. Antagonistic Drug Combinations Built by XGBoost
por: Ji, Xiangjun, et al.
Publicado: (2019)

CNN-XGBoost fusion-based affective state recognition using EEG spectrogram image analysis
por: Khan, Md. Sakib, et al.
Publicado: (2022)

Predicting Human Protein Subcellular Locations by Using a Combination of Network and Function Features
por: Chen, Lei, et al.
Publicado: (2021)

GANsDTA: Predicting Drug-Target Binding Affinity Using GANs
por: Zhao, Lingling, et al.
Publicado: (2020)

Prediction of apoptosis protein subcellular location based on amphiphilic pseudo amino acid composition
por: Su, Wenxia, et al.
Publicado: (2023)

XGBoost-SHAP-based interpretable diagnostic framework for alzheimer’s disease
por: Yi, Fuliang, et al.
Publicado: (2023)

Leader gene identification for digestive system cancers based on human subcellular location and cancer-related characteristics in protein–protein interaction networks
por: Chen, Hongwei, et al.
Publicado: (2022)

The expression pattern, subcellular localization and function of three sterol 14α-demethylases in Aspergillus oryzae
por: Jin, Qi, et al.
Publicado: (2023)

A Novel Hybrid CNN-SVR for CRISPR/Cas9 Guide RNA Activity Prediction
por: Zhang, Guishan, et al.
Publicado: (2020)

Human Protein Subcellular Localization with Integrated Source and Multi-label Ensemble Classifier
por: Guo, Xiaotong, et al.
Publicado: (2016)

tRNA Processing and Subcellular Trafficking Proteins Multitask in Pathways for Other RNAs
por: Hopper, Anita K., et al.
Publicado: (2019)

HIV-1 tropism prediction by the XGboost and HMM methods
por: Chen, Xiang, et al.
Publicado: (2019)

MulCNN: An efficient and accurate deep learning method based on gene embedding for cell type identification in single-cell RNA-seq data
por: Jiao, Linfang, et al.
Publicado: (2023)

Molecular cloning and expression analysis of three ThERFs involved in the response to waterlogging stress of Taxodium ‘Zhongshanshan406’, and subcellular localization of the gene products
por: Fan, Wencai, et al.
Publicado: (2018)

XGBoost-Based Feature Learning Method for Mining COVID-19 Novel Diagnostic Markers
por: Song, Xianbin, et al.
Publicado: (2022)

Pixel-level multimodal fusion deep networks for predicting subcellular organelle localization from label-free live-cell imaging
por: Wei, Zhihao, et al.
Publicado: (2022)

Anticancer Peptide Prediction via Multi-Kernel CNN and Attention Model
por: Wu, Xiujin, et al.
Publicado: (2022)

The effect of three novel feature extraction methods on the prediction of the subcellular localization of multi-site virus proteins
por: Wang, Lei, et al.
Publicado: (2017)

LncRRIsearch: A Web Server for lncRNA-RNA Interaction Prediction Integrated With Tissue-Specific Expression and Subcellular Localization Data
por: Fukunaga, Tsukasa, et al.
Publicado: (2019)

Refining Protein Subcellular Localization
por: Scott, Michelle S, et al.
Publicado: (2005)

Prediction of Alzheimer’s Disease-Associated Genes by Integration of GWAS Summary Data and Expression Data
por: Hao, Sicheng, et al.
Publicado: (2019)

A Predictive Model for the 10-year Overall Survival Status of Patients With Distant Metastases From Differentiated Thyroid Cancer Using XGBoost Algorithm-A Population-Based Analysis
por: Jin, Shuai, et al.
Publicado: (2022)

HN-CNN: A Heterogeneous Network Based on Convolutional Neural Network for m(7) G Site Disease Association Prediction
por: Zhang, Lin, et al.
Publicado: (2021)

Subcellular localization of the porcine deltacoronavirus nucleocapsid protein
por: Ding, Zhen, et al.
Publicado: (2020)

Method for Identifying Essential Proteins by Key Features of Proteins in a Novel Protein-Domain Network
por: He, Xin, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_009upam93ll245r6tvqe2h6m1p