Cargando…
Transferable Machine-Learning Model of the Electron Density
[Image: see text] The electronic charge density plays a central role in determining the behavior of matter at the atomic scale, but its computational evaluation requires demanding electronic-structure calculations. We introduce an atom-centered, symmetry-adapted framework to machine-learn the valenc...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2018
|
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6346381/ https://www.ncbi.nlm.nih.gov/pubmed/30693325 http://dx.doi.org/10.1021/acscentsci.8b00551 |
_version_ | 1783389739115610112 |
---|---|
author | Grisafi, Andrea Fabrizio, Alberto Meyer, Benjamin Wilkins, David M. Corminboeuf, Clemence Ceriotti, Michele |
author_facet | Grisafi, Andrea Fabrizio, Alberto Meyer, Benjamin Wilkins, David M. Corminboeuf, Clemence Ceriotti, Michele |
author_sort | Grisafi, Andrea |
collection | PubMed |
description | [Image: see text] The electronic charge density plays a central role in determining the behavior of matter at the atomic scale, but its computational evaluation requires demanding electronic-structure calculations. We introduce an atom-centered, symmetry-adapted framework to machine-learn the valence charge density based on a small number of reference calculations. The model is highly transferable, meaning it can be trained on electronic-structure data of small molecules and used to predict the charge density of larger compounds with low, linear-scaling cost. Applications are shown for various hydrocarbon molecules of increasing complexity and flexibility, and demonstrate the accuracy of the model when predicting the density on octane and octatetraene after training exclusively on butane and butadiene. This transferable, data-driven model can be used to interpret experiments, accelerate electronic structure calculations, and compute electrostatic interactions in molecules and condensed-phase systems. |
format | Online Article Text |
id | pubmed-6346381 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-63463812019-01-28 Transferable Machine-Learning Model of the Electron Density Grisafi, Andrea Fabrizio, Alberto Meyer, Benjamin Wilkins, David M. Corminboeuf, Clemence Ceriotti, Michele ACS Cent Sci [Image: see text] The electronic charge density plays a central role in determining the behavior of matter at the atomic scale, but its computational evaluation requires demanding electronic-structure calculations. We introduce an atom-centered, symmetry-adapted framework to machine-learn the valence charge density based on a small number of reference calculations. The model is highly transferable, meaning it can be trained on electronic-structure data of small molecules and used to predict the charge density of larger compounds with low, linear-scaling cost. Applications are shown for various hydrocarbon molecules of increasing complexity and flexibility, and demonstrate the accuracy of the model when predicting the density on octane and octatetraene after training exclusively on butane and butadiene. This transferable, data-driven model can be used to interpret experiments, accelerate electronic structure calculations, and compute electrostatic interactions in molecules and condensed-phase systems. American Chemical Society 2018-12-26 2019-01-23 /pmc/articles/PMC6346381/ /pubmed/30693325 http://dx.doi.org/10.1021/acscentsci.8b00551 Text en Copyright © 2018 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Grisafi, Andrea Fabrizio, Alberto Meyer, Benjamin Wilkins, David M. Corminboeuf, Clemence Ceriotti, Michele Transferable Machine-Learning Model of the Electron Density |
title | Transferable Machine-Learning Model of the Electron
Density |
title_full | Transferable Machine-Learning Model of the Electron
Density |
title_fullStr | Transferable Machine-Learning Model of the Electron
Density |
title_full_unstemmed | Transferable Machine-Learning Model of the Electron
Density |
title_short | Transferable Machine-Learning Model of the Electron
Density |
title_sort | transferable machine-learning model of the electron
density |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6346381/ https://www.ncbi.nlm.nih.gov/pubmed/30693325 http://dx.doi.org/10.1021/acscentsci.8b00551 |
work_keys_str_mv | AT grisafiandrea transferablemachinelearningmodeloftheelectrondensity AT fabrizioalberto transferablemachinelearningmodeloftheelectrondensity AT meyerbenjamin transferablemachinelearningmodeloftheelectrondensity AT wilkinsdavidm transferablemachinelearningmodeloftheelectrondensity AT corminboeufclemence transferablemachinelearningmodeloftheelectrondensity AT ceriottimichele transferablemachinelearningmodeloftheelectrondensity |