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Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa

South Africa has the highest tuberculosis (TB) disease incidence rate in the world, and TB is the leading infectious cause of death. Decisions on, and funding for, TB prevention and care policies are decentralised to the provincial governments and therefore, tools to inform policy need to operate at...

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Autores principales: Hippner, Piotr, Sumner, Tom, Houben, Rein MGJ, Cardenas, Vicky, Vassall, Anna, Bozzani, Fiammetta, Mudzengi, Don, Mvusi, Lindiwe, Churchyard, Gavin, White, Richard G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6347133/
https://www.ncbi.nlm.nih.gov/pubmed/30682028
http://dx.doi.org/10.1371/journal.pone.0209320
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author Hippner, Piotr
Sumner, Tom
Houben, Rein MGJ
Cardenas, Vicky
Vassall, Anna
Bozzani, Fiammetta
Mudzengi, Don
Mvusi, Lindiwe
Churchyard, Gavin
White, Richard G.
author_facet Hippner, Piotr
Sumner, Tom
Houben, Rein MGJ
Cardenas, Vicky
Vassall, Anna
Bozzani, Fiammetta
Mudzengi, Don
Mvusi, Lindiwe
Churchyard, Gavin
White, Richard G.
author_sort Hippner, Piotr
collection PubMed
description South Africa has the highest tuberculosis (TB) disease incidence rate in the world, and TB is the leading infectious cause of death. Decisions on, and funding for, TB prevention and care policies are decentralised to the provincial governments and therefore, tools to inform policy need to operate at this level. We describe the use of a mathematical model planning tool at provincial level in a high HIV and TB burden country, to estimate the impact on TB burden of achieving the 90-(90)-90 targets of the Stop TB Partnership Global Plan to End TB. “TIME Impact” is a freely available, user-friendly TB modelling tool. In collaboration with provincial TB programme staff, and the South African National TB Programme, models for three (of nine) provinces were calibrated to TB notifications, incidence, and screening data. Reported levels of TB programme activities were used as baseline inputs into the models, which were used to estimate the impact of scale-up of interventions focusing on screening, linkage to care and treatment success. All baseline models predicted a trend of decreasing TB incidence and mortality, consistent with recent data from South Africa. The projected impacts of the interventions differed by province and were greatly influenced by assumed current coverage levels. The absence of provincial TB burden estimates and uncertainty in current activity coverage levels were key data gaps. A user-friendly modelling tool allows TB burden and intervention impact projection at the sub-national level. Key sub-national data gaps should be addressed to improve the quality of sub-national model predictions.
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spelling pubmed-63471332019-02-02 Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa Hippner, Piotr Sumner, Tom Houben, Rein MGJ Cardenas, Vicky Vassall, Anna Bozzani, Fiammetta Mudzengi, Don Mvusi, Lindiwe Churchyard, Gavin White, Richard G. PLoS One Research Article South Africa has the highest tuberculosis (TB) disease incidence rate in the world, and TB is the leading infectious cause of death. Decisions on, and funding for, TB prevention and care policies are decentralised to the provincial governments and therefore, tools to inform policy need to operate at this level. We describe the use of a mathematical model planning tool at provincial level in a high HIV and TB burden country, to estimate the impact on TB burden of achieving the 90-(90)-90 targets of the Stop TB Partnership Global Plan to End TB. “TIME Impact” is a freely available, user-friendly TB modelling tool. In collaboration with provincial TB programme staff, and the South African National TB Programme, models for three (of nine) provinces were calibrated to TB notifications, incidence, and screening data. Reported levels of TB programme activities were used as baseline inputs into the models, which were used to estimate the impact of scale-up of interventions focusing on screening, linkage to care and treatment success. All baseline models predicted a trend of decreasing TB incidence and mortality, consistent with recent data from South Africa. The projected impacts of the interventions differed by province and were greatly influenced by assumed current coverage levels. The absence of provincial TB burden estimates and uncertainty in current activity coverage levels were key data gaps. A user-friendly modelling tool allows TB burden and intervention impact projection at the sub-national level. Key sub-national data gaps should be addressed to improve the quality of sub-national model predictions. Public Library of Science 2019-01-25 /pmc/articles/PMC6347133/ /pubmed/30682028 http://dx.doi.org/10.1371/journal.pone.0209320 Text en © 2019 Hippner et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Hippner, Piotr
Sumner, Tom
Houben, Rein MGJ
Cardenas, Vicky
Vassall, Anna
Bozzani, Fiammetta
Mudzengi, Don
Mvusi, Lindiwe
Churchyard, Gavin
White, Richard G.
Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa
title Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa
title_full Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa
title_fullStr Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa
title_full_unstemmed Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa
title_short Application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in South Africa
title_sort application of provincial data in mathematical modelling to inform sub-national tuberculosis program decision-making in south africa
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6347133/
https://www.ncbi.nlm.nih.gov/pubmed/30682028
http://dx.doi.org/10.1371/journal.pone.0209320
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