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Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae

The activities of microalgae support nutrient cycling that helps to sustain aquatic and terrestrial ecosystems. Most microalgal species, especially those from the subtropics, are genomically uncharacterized. Here we report the isolation and genomic characterization of 22 microalgal species from subt...

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Autores principales: Nelson, David R., Chaiboonchoe, Amphun, Fu, Weiqi, Hazzouri, Khaled M., Huang, Ziyuan, Jaiswal, Ashish, Daakour, Sarah, Mystikou, Alexandra, Arnoux, Marc, Sultana, Mehar, Salehi-Ashtiani, Kourosh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6348204/
https://www.ncbi.nlm.nih.gov/pubmed/30684492
http://dx.doi.org/10.1016/j.isci.2018.12.035
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author Nelson, David R.
Chaiboonchoe, Amphun
Fu, Weiqi
Hazzouri, Khaled M.
Huang, Ziyuan
Jaiswal, Ashish
Daakour, Sarah
Mystikou, Alexandra
Arnoux, Marc
Sultana, Mehar
Salehi-Ashtiani, Kourosh
author_facet Nelson, David R.
Chaiboonchoe, Amphun
Fu, Weiqi
Hazzouri, Khaled M.
Huang, Ziyuan
Jaiswal, Ashish
Daakour, Sarah
Mystikou, Alexandra
Arnoux, Marc
Sultana, Mehar
Salehi-Ashtiani, Kourosh
author_sort Nelson, David R.
collection PubMed
description The activities of microalgae support nutrient cycling that helps to sustain aquatic and terrestrial ecosystems. Most microalgal species, especially those from the subtropics, are genomically uncharacterized. Here we report the isolation and genomic characterization of 22 microalgal species from subtropical coastal regions belonging to multiple clades and three from temperate areas. Halotolerant strains including Halamphora, Dunaliella, Nannochloris, and Chloroidium comprised the majority of these isolates. The subtropical-based microalgae contained arrays of methyltransferase, pyridine nucleotide-disulfide oxidoreductase, abhydrolase, cystathionine synthase, and small-molecule transporter domains present at high relative abundance. We found that genes for sulfate transport, sulfotransferase, and glutathione S-transferase activities were especially abundant in subtropical, coastal microalgal species and halophytic species in general. Our metabolomics analyses indicate lineage- and habitat-specific sets of biomolecules implicated in niche-specific biological processes. This work effectively expands the collection of available microalgal genomes by ∼50%, and the generated resources provide perspectives for studying halophyte adaptive traits.
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spelling pubmed-63482042019-01-31 Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae Nelson, David R. Chaiboonchoe, Amphun Fu, Weiqi Hazzouri, Khaled M. Huang, Ziyuan Jaiswal, Ashish Daakour, Sarah Mystikou, Alexandra Arnoux, Marc Sultana, Mehar Salehi-Ashtiani, Kourosh iScience Article The activities of microalgae support nutrient cycling that helps to sustain aquatic and terrestrial ecosystems. Most microalgal species, especially those from the subtropics, are genomically uncharacterized. Here we report the isolation and genomic characterization of 22 microalgal species from subtropical coastal regions belonging to multiple clades and three from temperate areas. Halotolerant strains including Halamphora, Dunaliella, Nannochloris, and Chloroidium comprised the majority of these isolates. The subtropical-based microalgae contained arrays of methyltransferase, pyridine nucleotide-disulfide oxidoreductase, abhydrolase, cystathionine synthase, and small-molecule transporter domains present at high relative abundance. We found that genes for sulfate transport, sulfotransferase, and glutathione S-transferase activities were especially abundant in subtropical, coastal microalgal species and halophytic species in general. Our metabolomics analyses indicate lineage- and habitat-specific sets of biomolecules implicated in niche-specific biological processes. This work effectively expands the collection of available microalgal genomes by ∼50%, and the generated resources provide perspectives for studying halophyte adaptive traits. Elsevier 2019-01-04 /pmc/articles/PMC6348204/ /pubmed/30684492 http://dx.doi.org/10.1016/j.isci.2018.12.035 Text en © 2019 The Author(s) http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Nelson, David R.
Chaiboonchoe, Amphun
Fu, Weiqi
Hazzouri, Khaled M.
Huang, Ziyuan
Jaiswal, Ashish
Daakour, Sarah
Mystikou, Alexandra
Arnoux, Marc
Sultana, Mehar
Salehi-Ashtiani, Kourosh
Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae
title Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae
title_full Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae
title_fullStr Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae
title_full_unstemmed Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae
title_short Potential for Heightened Sulfur-Metabolic Capacity in Coastal Subtropical Microalgae
title_sort potential for heightened sulfur-metabolic capacity in coastal subtropical microalgae
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6348204/
https://www.ncbi.nlm.nih.gov/pubmed/30684492
http://dx.doi.org/10.1016/j.isci.2018.12.035
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