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Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms

Due to its worldwide coverage and high revisit time, satellite-based remote sensing provides the ability to monitor in-season crop state variables and yields globally. In this study, we presented a novel approach to training agronomic satellite retrieval algorithms by utilizing collocated crop growt...

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Detalles Bibliográficos
Autores principales: Levitan, Nathaniel, Gross, Barry
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349260/
https://www.ncbi.nlm.nih.gov/pubmed/30701108
http://dx.doi.org/10.3390/rs10121968
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author Levitan, Nathaniel
Gross, Barry
author_facet Levitan, Nathaniel
Gross, Barry
author_sort Levitan, Nathaniel
collection PubMed
description Due to its worldwide coverage and high revisit time, satellite-based remote sensing provides the ability to monitor in-season crop state variables and yields globally. In this study, we presented a novel approach to training agronomic satellite retrieval algorithms by utilizing collocated crop growth model simulations and solar-reflective satellite measurements. Specifically, we showed that bidirectional long short-term memory networks (BLSTMs) can be trained to predict the in-season state variables and yields of Agricultural Production Systems sIMulator (APSIM) maize crop growth model simulations from collocated Moderate Resolution Imaging Spectroradiometer (MODIS) 500-m satellite measurements over the United States Corn Belt at a regional scale. We evaluated the performance of the BLSTMs through both k-fold cross validation and comparison to regional scale ground-truth yields and phenology. Using k-fold cross validation, we showed that three distinct in-season maize state variables (leaf area index, aboveground biomass, and specific leaf area) can be retrieved with cross-validated R(2) values ranging from 0.4 to 0.8 for significant portions of the season. Several other plant, soil, and phenological in-season state variables were also evaluated in the study for their retrievability via k-fold cross validation. In addition, by comparing to survey-based United State Department of Agriculture (USDA) ground truth data, we showed that the BLSTMs are able to predict actual county-level yields with R(2) values between 0.45 and 0.6 and actual state-level phenological dates (emergence, silking, and maturity) with R(2) values between 0.75 and 0.85. We believe that a potential application of this methodology is to develop satellite products to monitor in-season field-scale crop growth on a global scale by reproducing the methodology with field-scale crop growth model simulations (utilizing farmer-recorded field-scale agromanagement data) and collocated high-resolution satellite data (fused with moderate-resolution satellite data).
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spelling pubmed-63492602019-01-28 Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms Levitan, Nathaniel Gross, Barry Remote Sens (Basel) Article Due to its worldwide coverage and high revisit time, satellite-based remote sensing provides the ability to monitor in-season crop state variables and yields globally. In this study, we presented a novel approach to training agronomic satellite retrieval algorithms by utilizing collocated crop growth model simulations and solar-reflective satellite measurements. Specifically, we showed that bidirectional long short-term memory networks (BLSTMs) can be trained to predict the in-season state variables and yields of Agricultural Production Systems sIMulator (APSIM) maize crop growth model simulations from collocated Moderate Resolution Imaging Spectroradiometer (MODIS) 500-m satellite measurements over the United States Corn Belt at a regional scale. We evaluated the performance of the BLSTMs through both k-fold cross validation and comparison to regional scale ground-truth yields and phenology. Using k-fold cross validation, we showed that three distinct in-season maize state variables (leaf area index, aboveground biomass, and specific leaf area) can be retrieved with cross-validated R(2) values ranging from 0.4 to 0.8 for significant portions of the season. Several other plant, soil, and phenological in-season state variables were also evaluated in the study for their retrievability via k-fold cross validation. In addition, by comparing to survey-based United State Department of Agriculture (USDA) ground truth data, we showed that the BLSTMs are able to predict actual county-level yields with R(2) values between 0.45 and 0.6 and actual state-level phenological dates (emergence, silking, and maturity) with R(2) values between 0.75 and 0.85. We believe that a potential application of this methodology is to develop satellite products to monitor in-season field-scale crop growth on a global scale by reproducing the methodology with field-scale crop growth model simulations (utilizing farmer-recorded field-scale agromanagement data) and collocated high-resolution satellite data (fused with moderate-resolution satellite data). 2018-12-06 2018 /pmc/articles/PMC6349260/ /pubmed/30701108 http://dx.doi.org/10.3390/rs10121968 Text en This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Levitan, Nathaniel
Gross, Barry
Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms
title Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms
title_full Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms
title_fullStr Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms
title_full_unstemmed Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms
title_short Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms
title_sort utilizing collocated crop growth model simulations to train agronomic satellite retrieval algorithms
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349260/
https://www.ncbi.nlm.nih.gov/pubmed/30701108
http://dx.doi.org/10.3390/rs10121968
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