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Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms
Due to its worldwide coverage and high revisit time, satellite-based remote sensing provides the ability to monitor in-season crop state variables and yields globally. In this study, we presented a novel approach to training agronomic satellite retrieval algorithms by utilizing collocated crop growt...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2018
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349260/ https://www.ncbi.nlm.nih.gov/pubmed/30701108 http://dx.doi.org/10.3390/rs10121968 |
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author | Levitan, Nathaniel Gross, Barry |
author_facet | Levitan, Nathaniel Gross, Barry |
author_sort | Levitan, Nathaniel |
collection | PubMed |
description | Due to its worldwide coverage and high revisit time, satellite-based remote sensing provides the ability to monitor in-season crop state variables and yields globally. In this study, we presented a novel approach to training agronomic satellite retrieval algorithms by utilizing collocated crop growth model simulations and solar-reflective satellite measurements. Specifically, we showed that bidirectional long short-term memory networks (BLSTMs) can be trained to predict the in-season state variables and yields of Agricultural Production Systems sIMulator (APSIM) maize crop growth model simulations from collocated Moderate Resolution Imaging Spectroradiometer (MODIS) 500-m satellite measurements over the United States Corn Belt at a regional scale. We evaluated the performance of the BLSTMs through both k-fold cross validation and comparison to regional scale ground-truth yields and phenology. Using k-fold cross validation, we showed that three distinct in-season maize state variables (leaf area index, aboveground biomass, and specific leaf area) can be retrieved with cross-validated R(2) values ranging from 0.4 to 0.8 for significant portions of the season. Several other plant, soil, and phenological in-season state variables were also evaluated in the study for their retrievability via k-fold cross validation. In addition, by comparing to survey-based United State Department of Agriculture (USDA) ground truth data, we showed that the BLSTMs are able to predict actual county-level yields with R(2) values between 0.45 and 0.6 and actual state-level phenological dates (emergence, silking, and maturity) with R(2) values between 0.75 and 0.85. We believe that a potential application of this methodology is to develop satellite products to monitor in-season field-scale crop growth on a global scale by reproducing the methodology with field-scale crop growth model simulations (utilizing farmer-recorded field-scale agromanagement data) and collocated high-resolution satellite data (fused with moderate-resolution satellite data). |
format | Online Article Text |
id | pubmed-6349260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
record_format | MEDLINE/PubMed |
spelling | pubmed-63492602019-01-28 Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms Levitan, Nathaniel Gross, Barry Remote Sens (Basel) Article Due to its worldwide coverage and high revisit time, satellite-based remote sensing provides the ability to monitor in-season crop state variables and yields globally. In this study, we presented a novel approach to training agronomic satellite retrieval algorithms by utilizing collocated crop growth model simulations and solar-reflective satellite measurements. Specifically, we showed that bidirectional long short-term memory networks (BLSTMs) can be trained to predict the in-season state variables and yields of Agricultural Production Systems sIMulator (APSIM) maize crop growth model simulations from collocated Moderate Resolution Imaging Spectroradiometer (MODIS) 500-m satellite measurements over the United States Corn Belt at a regional scale. We evaluated the performance of the BLSTMs through both k-fold cross validation and comparison to regional scale ground-truth yields and phenology. Using k-fold cross validation, we showed that three distinct in-season maize state variables (leaf area index, aboveground biomass, and specific leaf area) can be retrieved with cross-validated R(2) values ranging from 0.4 to 0.8 for significant portions of the season. Several other plant, soil, and phenological in-season state variables were also evaluated in the study for their retrievability via k-fold cross validation. In addition, by comparing to survey-based United State Department of Agriculture (USDA) ground truth data, we showed that the BLSTMs are able to predict actual county-level yields with R(2) values between 0.45 and 0.6 and actual state-level phenological dates (emergence, silking, and maturity) with R(2) values between 0.75 and 0.85. We believe that a potential application of this methodology is to develop satellite products to monitor in-season field-scale crop growth on a global scale by reproducing the methodology with field-scale crop growth model simulations (utilizing farmer-recorded field-scale agromanagement data) and collocated high-resolution satellite data (fused with moderate-resolution satellite data). 2018-12-06 2018 /pmc/articles/PMC6349260/ /pubmed/30701108 http://dx.doi.org/10.3390/rs10121968 Text en This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Levitan, Nathaniel Gross, Barry Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms |
title | Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms |
title_full | Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms |
title_fullStr | Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms |
title_full_unstemmed | Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms |
title_short | Utilizing Collocated Crop Growth Model Simulations to Train Agronomic Satellite Retrieval Algorithms |
title_sort | utilizing collocated crop growth model simulations to train agronomic satellite retrieval algorithms |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349260/ https://www.ncbi.nlm.nih.gov/pubmed/30701108 http://dx.doi.org/10.3390/rs10121968 |
work_keys_str_mv | AT levitannathaniel utilizingcollocatedcropgrowthmodelsimulationstotrainagronomicsatelliteretrievalalgorithms AT grossbarry utilizingcollocatedcropgrowthmodelsimulationstotrainagronomicsatelliteretrievalalgorithms |