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Host and Microbiome Genome-Wide Association Studies: Current State and Challenges

The involvement of the microbiome in health and disease is well established. Microbiome genome-wide association studies (mGWAS) are used to elucidate the interaction of host genetic variation with the microbiome. The emergence of this relatively new field has been facilitated by the advent of next g...

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Autores principales: Awany, Denis, Allali, Imane, Dalvie, Shareefa, Hemmings, Sian, Mwaikono, Kilaza S., Thomford, Nicholas E., Gomez, Andres, Mulder, Nicola, Chimusa, Emile R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349833/
https://www.ncbi.nlm.nih.gov/pubmed/30723493
http://dx.doi.org/10.3389/fgene.2018.00637
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author Awany, Denis
Allali, Imane
Dalvie, Shareefa
Hemmings, Sian
Mwaikono, Kilaza S.
Thomford, Nicholas E.
Gomez, Andres
Mulder, Nicola
Chimusa, Emile R.
author_facet Awany, Denis
Allali, Imane
Dalvie, Shareefa
Hemmings, Sian
Mwaikono, Kilaza S.
Thomford, Nicholas E.
Gomez, Andres
Mulder, Nicola
Chimusa, Emile R.
author_sort Awany, Denis
collection PubMed
description The involvement of the microbiome in health and disease is well established. Microbiome genome-wide association studies (mGWAS) are used to elucidate the interaction of host genetic variation with the microbiome. The emergence of this relatively new field has been facilitated by the advent of next generation sequencing technologies that enable the investigation of the complex interaction between host genetics and microbial communities. In this paper, we review recent studies investigating host–microbiome interactions using mGWAS. Additionally, we highlight the marked disparity in the sampling population of mGWAS carried out to date and draw attention to the critical need for inclusion of diverse populations.
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spelling pubmed-63498332019-02-05 Host and Microbiome Genome-Wide Association Studies: Current State and Challenges Awany, Denis Allali, Imane Dalvie, Shareefa Hemmings, Sian Mwaikono, Kilaza S. Thomford, Nicholas E. Gomez, Andres Mulder, Nicola Chimusa, Emile R. Front Genet Genetics The involvement of the microbiome in health and disease is well established. Microbiome genome-wide association studies (mGWAS) are used to elucidate the interaction of host genetic variation with the microbiome. The emergence of this relatively new field has been facilitated by the advent of next generation sequencing technologies that enable the investigation of the complex interaction between host genetics and microbial communities. In this paper, we review recent studies investigating host–microbiome interactions using mGWAS. Additionally, we highlight the marked disparity in the sampling population of mGWAS carried out to date and draw attention to the critical need for inclusion of diverse populations. Frontiers Media S.A. 2019-01-22 /pmc/articles/PMC6349833/ /pubmed/30723493 http://dx.doi.org/10.3389/fgene.2018.00637 Text en Copyright © 2018 Awany, Allali, Dalvie, Hemmings, Mwaikono, Thomford, Gomez, Mulder and Chimusa. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Awany, Denis
Allali, Imane
Dalvie, Shareefa
Hemmings, Sian
Mwaikono, Kilaza S.
Thomford, Nicholas E.
Gomez, Andres
Mulder, Nicola
Chimusa, Emile R.
Host and Microbiome Genome-Wide Association Studies: Current State and Challenges
title Host and Microbiome Genome-Wide Association Studies: Current State and Challenges
title_full Host and Microbiome Genome-Wide Association Studies: Current State and Challenges
title_fullStr Host and Microbiome Genome-Wide Association Studies: Current State and Challenges
title_full_unstemmed Host and Microbiome Genome-Wide Association Studies: Current State and Challenges
title_short Host and Microbiome Genome-Wide Association Studies: Current State and Challenges
title_sort host and microbiome genome-wide association studies: current state and challenges
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349833/
https://www.ncbi.nlm.nih.gov/pubmed/30723493
http://dx.doi.org/10.3389/fgene.2018.00637
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