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Detecting sequences of system states in temporal networks

Many time-evolving systems in nature, society and technology leave traces of the interactions within them. These interactions form temporal networks that reflect the states of the systems. In this work, we pursue a coarse-grained description of these systems by proposing a method to assign discrete...

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Detalles Bibliográficos
Autores principales: Masuda, Naoki, Holme, Petter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349888/
https://www.ncbi.nlm.nih.gov/pubmed/30692579
http://dx.doi.org/10.1038/s41598-018-37534-2
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author Masuda, Naoki
Holme, Petter
author_facet Masuda, Naoki
Holme, Petter
author_sort Masuda, Naoki
collection PubMed
description Many time-evolving systems in nature, society and technology leave traces of the interactions within them. These interactions form temporal networks that reflect the states of the systems. In this work, we pursue a coarse-grained description of these systems by proposing a method to assign discrete states to the systems and inferring the sequence of such states from the data. Such states could, for example, correspond to a mental state (as inferred from neuroimaging data) or the operational state of an organization (as inferred by interpersonal communication). Our method combines a graph distance measure and hierarchical clustering. Using several empirical data sets of social temporal networks, we show that our method is capable of inferring the system’s states such as distinct activities in a school and a weekday state as opposed to a weekend state. We expect the methods to be equally useful in other settings such as temporally varying protein interactions, ecological interspecific interactions, functional connectivity in the brain and adaptive social networks.
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spelling pubmed-63498882019-01-30 Detecting sequences of system states in temporal networks Masuda, Naoki Holme, Petter Sci Rep Article Many time-evolving systems in nature, society and technology leave traces of the interactions within them. These interactions form temporal networks that reflect the states of the systems. In this work, we pursue a coarse-grained description of these systems by proposing a method to assign discrete states to the systems and inferring the sequence of such states from the data. Such states could, for example, correspond to a mental state (as inferred from neuroimaging data) or the operational state of an organization (as inferred by interpersonal communication). Our method combines a graph distance measure and hierarchical clustering. Using several empirical data sets of social temporal networks, we show that our method is capable of inferring the system’s states such as distinct activities in a school and a weekday state as opposed to a weekend state. We expect the methods to be equally useful in other settings such as temporally varying protein interactions, ecological interspecific interactions, functional connectivity in the brain and adaptive social networks. Nature Publishing Group UK 2019-01-28 /pmc/articles/PMC6349888/ /pubmed/30692579 http://dx.doi.org/10.1038/s41598-018-37534-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Masuda, Naoki
Holme, Petter
Detecting sequences of system states in temporal networks
title Detecting sequences of system states in temporal networks
title_full Detecting sequences of system states in temporal networks
title_fullStr Detecting sequences of system states in temporal networks
title_full_unstemmed Detecting sequences of system states in temporal networks
title_short Detecting sequences of system states in temporal networks
title_sort detecting sequences of system states in temporal networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6349888/
https://www.ncbi.nlm.nih.gov/pubmed/30692579
http://dx.doi.org/10.1038/s41598-018-37534-2
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