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Using LC Retention Times in Organic Structure Determination: Drug Metabolite Identification
BACKGROUND: There is a continued need for improvements in the efficiency of metabolite structure elucidation. OBJECTIVE: We propose to take LC Retention Time (RT) into consideration during the process of structure determination. METHODS: Herein, we develop a simple methodology that employs a Chromat...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Bentham Science Publishers
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6350196/ https://www.ncbi.nlm.nih.gov/pubmed/30070179 http://dx.doi.org/10.2174/1872312812666180802093347 |
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author | Fitch, William L. Khojasteh, Cyrus Aliagas, Ignacio Johnson, Kevin |
author_facet | Fitch, William L. Khojasteh, Cyrus Aliagas, Ignacio Johnson, Kevin |
author_sort | Fitch, William L. |
collection | PubMed |
description | BACKGROUND: There is a continued need for improvements in the efficiency of metabolite structure elucidation. OBJECTIVE: We propose to take LC Retention Time (RT) into consideration during the process of structure determination. METHODS: Herein, we develop a simple methodology that employs a Chromatographic Hydrophobicity Index (CHI) framework for standardizing LC conditions and introduce and utilize the concept of a pre-dictable CHI change upon Phase 1 biotransformation (CHIbt). Through the analysis of literature exam-ples, we offer a Quantitative Structure-Retention Relationship (QSRR) for several types of biotransfor-mation (especially hydroxylation) using physicochemical properties (clogP, hydrogen bonding). RESULTS: The CHI system for retention indexing is shown to be practical and simple to implement. A da-tabase of CHIbt values has been created from re-incubation of 3 compounds and from analysis of an addi-tional 17 datasets from the literature. Application of this database is illustrated. CONCLUSION: In our experience, this simple methodology allows complementing the discovery efforts that saves resources for in-depth characterization using NMR. |
format | Online Article Text |
id | pubmed-6350196 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Bentham Science Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-63501962019-02-22 Using LC Retention Times in Organic Structure Determination: Drug
Metabolite Identification Fitch, William L. Khojasteh, Cyrus Aliagas, Ignacio Johnson, Kevin Drug Metab Lett Article BACKGROUND: There is a continued need for improvements in the efficiency of metabolite structure elucidation. OBJECTIVE: We propose to take LC Retention Time (RT) into consideration during the process of structure determination. METHODS: Herein, we develop a simple methodology that employs a Chromatographic Hydrophobicity Index (CHI) framework for standardizing LC conditions and introduce and utilize the concept of a pre-dictable CHI change upon Phase 1 biotransformation (CHIbt). Through the analysis of literature exam-ples, we offer a Quantitative Structure-Retention Relationship (QSRR) for several types of biotransfor-mation (especially hydroxylation) using physicochemical properties (clogP, hydrogen bonding). RESULTS: The CHI system for retention indexing is shown to be practical and simple to implement. A da-tabase of CHIbt values has been created from re-incubation of 3 compounds and from analysis of an addi-tional 17 datasets from the literature. Application of this database is illustrated. CONCLUSION: In our experience, this simple methodology allows complementing the discovery efforts that saves resources for in-depth characterization using NMR. Bentham Science Publishers 2018-12 2018-12 /pmc/articles/PMC6350196/ /pubmed/30070179 http://dx.doi.org/10.2174/1872312812666180802093347 Text en © 2018 Bentham Science Publishers https://creativecommons.org/licenses/by-nc/4.0/legalcode This is an open access article licensed under the terms of the Creative Commons Attribution-Non-Commercial 4.0 International Public License (CC BY-NC 4.0) (https://creativecommons.org/licenses/by-nc/4.0/legalcode), which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited. |
spellingShingle | Article Fitch, William L. Khojasteh, Cyrus Aliagas, Ignacio Johnson, Kevin Using LC Retention Times in Organic Structure Determination: Drug Metabolite Identification |
title | Using LC Retention Times in Organic Structure Determination: Drug
Metabolite Identification |
title_full | Using LC Retention Times in Organic Structure Determination: Drug
Metabolite Identification |
title_fullStr | Using LC Retention Times in Organic Structure Determination: Drug
Metabolite Identification |
title_full_unstemmed | Using LC Retention Times in Organic Structure Determination: Drug
Metabolite Identification |
title_short | Using LC Retention Times in Organic Structure Determination: Drug
Metabolite Identification |
title_sort | using lc retention times in organic structure determination: drug
metabolite identification |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6350196/ https://www.ncbi.nlm.nih.gov/pubmed/30070179 http://dx.doi.org/10.2174/1872312812666180802093347 |
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