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Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification

BACKGROUND: There is a continued need for improvements in the efficiency of metabolite structure elucidation. OBJECTIVE: We propose to take LC Retention Time (RT) into consideration during the process of structure determination. METHODS: Herein, we develop a simple methodology that employs a Chromat...

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Autores principales: Fitch, William L., Khojasteh, Cyrus, Aliagas, Ignacio, Johnson, Kevin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Bentham Science Publishers 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6350196/
https://www.ncbi.nlm.nih.gov/pubmed/30070179
http://dx.doi.org/10.2174/1872312812666180802093347
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author Fitch, William L.
Khojasteh, Cyrus
Aliagas, Ignacio
Johnson, Kevin
author_facet Fitch, William L.
Khojasteh, Cyrus
Aliagas, Ignacio
Johnson, Kevin
author_sort Fitch, William L.
collection PubMed
description BACKGROUND: There is a continued need for improvements in the efficiency of metabolite structure elucidation. OBJECTIVE: We propose to take LC Retention Time (RT) into consideration during the process of structure determination. METHODS: Herein, we develop a simple methodology that employs a Chromatographic Hydrophobicity Index (CHI) framework for standardizing LC conditions and introduce and utilize the concept of a pre-dictable CHI change upon Phase 1 biotransformation (CHIbt). Through the analysis of literature exam-ples, we offer a Quantitative Structure-Retention Relationship (QSRR) for several types of biotransfor-mation (especially hydroxylation) using physicochemical properties (clogP, hydrogen bonding). RESULTS: The CHI system for retention indexing is shown to be practical and simple to implement. A da-tabase of CHIbt values has been created from re-incubation of 3 compounds and from analysis of an addi-tional 17 datasets from the literature. Application of this database is illustrated. CONCLUSION: In our experience, this simple methodology allows complementing the discovery efforts that saves resources for in-depth characterization using NMR.
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spelling pubmed-63501962019-02-22 Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification Fitch, William L. Khojasteh, Cyrus Aliagas, Ignacio Johnson, Kevin Drug Metab Lett Article BACKGROUND: There is a continued need for improvements in the efficiency of metabolite structure elucidation. OBJECTIVE: We propose to take LC Retention Time (RT) into consideration during the process of structure determination. METHODS: Herein, we develop a simple methodology that employs a Chromatographic Hydrophobicity Index (CHI) framework for standardizing LC conditions and introduce and utilize the concept of a pre-dictable CHI change upon Phase 1 biotransformation (CHIbt). Through the analysis of literature exam-ples, we offer a Quantitative Structure-Retention Relationship (QSRR) for several types of biotransfor-mation (especially hydroxylation) using physicochemical properties (clogP, hydrogen bonding). RESULTS: The CHI system for retention indexing is shown to be practical and simple to implement. A da-tabase of CHIbt values has been created from re-incubation of 3 compounds and from analysis of an addi-tional 17 datasets from the literature. Application of this database is illustrated. CONCLUSION: In our experience, this simple methodology allows complementing the discovery efforts that saves resources for in-depth characterization using NMR. Bentham Science Publishers 2018-12 2018-12 /pmc/articles/PMC6350196/ /pubmed/30070179 http://dx.doi.org/10.2174/1872312812666180802093347 Text en © 2018 Bentham Science Publishers https://creativecommons.org/licenses/by-nc/4.0/legalcode This is an open access article licensed under the terms of the Creative Commons Attribution-Non-Commercial 4.0 International Public License (CC BY-NC 4.0) (https://creativecommons.org/licenses/by-nc/4.0/legalcode), which permits unrestricted, non-commercial use, distribution and reproduction in any medium, provided the work is properly cited.
spellingShingle Article
Fitch, William L.
Khojasteh, Cyrus
Aliagas, Ignacio
Johnson, Kevin
Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification
title Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification
title_full Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification
title_fullStr Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification
title_full_unstemmed Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification
title_short Using LC Retention Times in Organic Structure Determination: Drug 
Metabolite Identification
title_sort using lc retention times in organic structure determination: drug 
metabolite identification
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6350196/
https://www.ncbi.nlm.nih.gov/pubmed/30070179
http://dx.doi.org/10.2174/1872312812666180802093347
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