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Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer
FAM64A, a marker of cell proliferation, has been investigated as a potential biomarker in several cancers. In the present study, we examined the value of FAM64A expression in the diagnosis and prognosis of pancreatic cancer through bioinformatics analysis of data obtained from The Cancer Genome Atla...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6351057/ https://www.ncbi.nlm.nih.gov/pubmed/30695070 http://dx.doi.org/10.1371/journal.pone.0211291 |
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author | Jiao, Yan Fu, Zhuo Li, Yanqing Zhang, Wei Liu, Yahui |
author_facet | Jiao, Yan Fu, Zhuo Li, Yanqing Zhang, Wei Liu, Yahui |
author_sort | Jiao, Yan |
collection | PubMed |
description | FAM64A, a marker of cell proliferation, has been investigated as a potential biomarker in several cancers. In the present study, we examined the value of FAM64A expression in the diagnosis and prognosis of pancreatic cancer through bioinformatics analysis of data obtained from The Cancer Genome Atlas (TCGA) database. The diagnostic value of FAM64A expression in pancreatic cancer tissue was deteremined through receiver operating characteristic (ROC) curve analysis, and based on the obtained cut-off value, patients were divided into two groups (high FAM64A expression and low FAM64A expression). Chi-square and Fisher exact tests were applied to identify associations between FAM64A expression and clinical features. Moreover, the effect of FAM64A expression in the survival of pancreatic cancer patients was observed by Kaplan-Meier and Cox analyses. Gene set enrichment analysis (GSEA) was performed using the TCGA dataset. Our results showed that high FAM64A expression in pancreatic cancer was associated with survival status, overall survival (OS), and recurrence. The area under the ROC curve was 0.736, which indicated modest diagnostic value. Patients with higher FAM64A expression had significantly shorter OS and recurrence-free survival (RFS) times. Multivariate survival analysis demonstrated that high FAM64A expression was an independent risk factor for OS and RFS. GSEA identified mitotic spindles, myc targets, MTORC1 signaling, G2M checkpoint, E2F targets, DNA repair, glycolysis and unfolded protein response as differentially enriched with the high FAM64A expression phenotype. In conclusion, high FAM64A mRNA expression is an independent risk factor for poor prognosis in pancreatic cancer. |
format | Online Article Text |
id | pubmed-6351057 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-63510572019-02-15 Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer Jiao, Yan Fu, Zhuo Li, Yanqing Zhang, Wei Liu, Yahui PLoS One Research Article FAM64A, a marker of cell proliferation, has been investigated as a potential biomarker in several cancers. In the present study, we examined the value of FAM64A expression in the diagnosis and prognosis of pancreatic cancer through bioinformatics analysis of data obtained from The Cancer Genome Atlas (TCGA) database. The diagnostic value of FAM64A expression in pancreatic cancer tissue was deteremined through receiver operating characteristic (ROC) curve analysis, and based on the obtained cut-off value, patients were divided into two groups (high FAM64A expression and low FAM64A expression). Chi-square and Fisher exact tests were applied to identify associations between FAM64A expression and clinical features. Moreover, the effect of FAM64A expression in the survival of pancreatic cancer patients was observed by Kaplan-Meier and Cox analyses. Gene set enrichment analysis (GSEA) was performed using the TCGA dataset. Our results showed that high FAM64A expression in pancreatic cancer was associated with survival status, overall survival (OS), and recurrence. The area under the ROC curve was 0.736, which indicated modest diagnostic value. Patients with higher FAM64A expression had significantly shorter OS and recurrence-free survival (RFS) times. Multivariate survival analysis demonstrated that high FAM64A expression was an independent risk factor for OS and RFS. GSEA identified mitotic spindles, myc targets, MTORC1 signaling, G2M checkpoint, E2F targets, DNA repair, glycolysis and unfolded protein response as differentially enriched with the high FAM64A expression phenotype. In conclusion, high FAM64A mRNA expression is an independent risk factor for poor prognosis in pancreatic cancer. Public Library of Science 2019-01-29 /pmc/articles/PMC6351057/ /pubmed/30695070 http://dx.doi.org/10.1371/journal.pone.0211291 Text en © 2019 Jiao et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Jiao, Yan Fu, Zhuo Li, Yanqing Zhang, Wei Liu, Yahui Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer |
title | Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer |
title_full | Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer |
title_fullStr | Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer |
title_full_unstemmed | Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer |
title_short | Aberrant FAM64A mRNA expression is an independent predictor of poor survival in pancreatic cancer |
title_sort | aberrant fam64a mrna expression is an independent predictor of poor survival in pancreatic cancer |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6351057/ https://www.ncbi.nlm.nih.gov/pubmed/30695070 http://dx.doi.org/10.1371/journal.pone.0211291 |
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