Cargando…
Non-sequential protein structure alignment by conformational space annealing and local refinement
Protein structure alignment is an important tool for studying evolutionary biology and protein modeling. A tool which intensively searches for the globally optimal non-sequential alignments is rarely found. We propose ALIGN-CSA which shows improvement in scores, such as DALI-score, SP-score, SO-scor...
Autores principales: | Joung, InSuk, Kim, Jong Yun, Joo, Keehyoung, Lee, Jooyoung |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6353097/ https://www.ncbi.nlm.nih.gov/pubmed/30699145 http://dx.doi.org/10.1371/journal.pone.0210177 |
Ejemplares similares
-
Sigma-RF: prediction of the variability of spatial restraints in template-based modeling by random forest
por: Lee, Juyong, et al.
Publicado: (2015) -
CRFalign: A Sequence-Structure Alignment of Proteins Based on a Combination of HMM-HMM Comparison and Conditional Random Fields
por: Lee, Sung Jong, et al.
Publicado: (2022) -
Local Alignment Refinement Using Structural Assessment
por: Chodanowski, Pierre, et al.
Publicado: (2008) -
Direct experimental observation of blue-light-induced conformational change and intermolecular interactions of cryptochrome
por: Li, Pei, et al.
Publicado: (2022) -
Multiple Simulated Annealing-Molecular Dynamics (MSA-MD) for Conformational Space Search of Peptide and Miniprotein
por: Hao, Ge-Fei, et al.
Publicado: (2015)