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Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis
This dataset is associated with our research article ‘Identification of host-defence related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus Subclinical mastitis’ published in International Journal of Molecular Sciences. Milk samples were c...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6354741/ https://www.ncbi.nlm.nih.gov/pubmed/30733978 http://dx.doi.org/10.1016/j.dib.2019.01.013 |
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author | Abdelmegid, Shaimaa Murugaiyan, Jayaseelan Abo-Ismail, Mohamed Caswell, Jeff Kelton, David Kirby, Gordon |
author_facet | Abdelmegid, Shaimaa Murugaiyan, Jayaseelan Abo-Ismail, Mohamed Caswell, Jeff Kelton, David Kirby, Gordon |
author_sort | Abdelmegid, Shaimaa |
collection | PubMed |
description | This dataset is associated with our research article ‘Identification of host-defence related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus Subclinical mastitis’ published in International Journal of Molecular Sciences. Milk samples were collected from cows suffering from S. aureus-associated subclinical mastitis and the proteins abundance were identified in comparison with samples collected from the control cows using liquid chromatography-mass spectrometry (LC-MS)-based label free proteomics analysis. Following the MS measurements, the raw spectra were processed using MaxQuant-Andromeda software and the protein identification was carried out through a search against Uniprot FASTA files of the Bos taurus reference proteome. Perseus software analysis was applied for computation of protein abundance. The raw file presented in this DiB was deposition at PRIDE repository in the PRIDE repository with the dataset identifier PXD007516. |
format | Online Article Text |
id | pubmed-6354741 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-63547412019-02-07 Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis Abdelmegid, Shaimaa Murugaiyan, Jayaseelan Abo-Ismail, Mohamed Caswell, Jeff Kelton, David Kirby, Gordon Data Brief Proteomics This dataset is associated with our research article ‘Identification of host-defence related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus Subclinical mastitis’ published in International Journal of Molecular Sciences. Milk samples were collected from cows suffering from S. aureus-associated subclinical mastitis and the proteins abundance were identified in comparison with samples collected from the control cows using liquid chromatography-mass spectrometry (LC-MS)-based label free proteomics analysis. Following the MS measurements, the raw spectra were processed using MaxQuant-Andromeda software and the protein identification was carried out through a search against Uniprot FASTA files of the Bos taurus reference proteome. Perseus software analysis was applied for computation of protein abundance. The raw file presented in this DiB was deposition at PRIDE repository in the PRIDE repository with the dataset identifier PXD007516. Elsevier 2019-01-10 /pmc/articles/PMC6354741/ /pubmed/30733978 http://dx.doi.org/10.1016/j.dib.2019.01.013 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Proteomics Abdelmegid, Shaimaa Murugaiyan, Jayaseelan Abo-Ismail, Mohamed Caswell, Jeff Kelton, David Kirby, Gordon Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis |
title | Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis |
title_full | Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis |
title_fullStr | Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis |
title_full_unstemmed | Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis |
title_short | Mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with Staphylococcus aureus subclinical mastitis |
title_sort | mass spectrometry data from identification of host-defense related proteins using label-free quantitative proteomic analysis of milk whey from cows with staphylococcus aureus subclinical mastitis |
topic | Proteomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6354741/ https://www.ncbi.nlm.nih.gov/pubmed/30733978 http://dx.doi.org/10.1016/j.dib.2019.01.013 |
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