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Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes

Accurate discrimination between different cells at the molecular level is particularly important for disease diagnosis. Endogenous RNAs are such molecular candidates for cancer cell subtype identification. But the key is that there is often low abundance of RNAs in live cells, or some RNAs are often...

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Autores principales: Quan, Ke, Li, Jing, Wang, Jiaoli, Xie, Nuli, Wei, Qiaomei, Tang, Jinlu, Yang, Xiaohai, Wang, Kemin, Huang, Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6354832/
https://www.ncbi.nlm.nih.gov/pubmed/30809361
http://dx.doi.org/10.1039/c8sc04887h
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author Quan, Ke
Li, Jing
Wang, Jiaoli
Xie, Nuli
Wei, Qiaomei
Tang, Jinlu
Yang, Xiaohai
Wang, Kemin
Huang, Jin
author_facet Quan, Ke
Li, Jing
Wang, Jiaoli
Xie, Nuli
Wei, Qiaomei
Tang, Jinlu
Yang, Xiaohai
Wang, Kemin
Huang, Jin
author_sort Quan, Ke
collection PubMed
description Accurate discrimination between different cells at the molecular level is particularly important for disease diagnosis. Endogenous RNAs are such molecular candidates for cancer cell subtype identification. But the key is that there is often low abundance of RNAs in live cells, or some RNAs are often shared by multiple types of cells. Thus, we have designed dual-microRNA-controlled double-amplified cascaded logic DNA circuits for cancer cell subtype identification. The basic idea is to improve sensitivity by cascading DNAzyme and hybridization chain reaction (HCR), and improve accuracy by simultaneous detection of miR-122 and miR-21. The in-tube and in-cell experimental results show that the cascaded logic DNA circuits can work and serve to differentiate the liver cancer cells Huh7 from other normal cells and cancer cells. We anticipate that this design can be widely applied in facilitating basic biomedical research and accurate disease diagnosis.
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spelling pubmed-63548322019-02-26 Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes Quan, Ke Li, Jing Wang, Jiaoli Xie, Nuli Wei, Qiaomei Tang, Jinlu Yang, Xiaohai Wang, Kemin Huang, Jin Chem Sci Chemistry Accurate discrimination between different cells at the molecular level is particularly important for disease diagnosis. Endogenous RNAs are such molecular candidates for cancer cell subtype identification. But the key is that there is often low abundance of RNAs in live cells, or some RNAs are often shared by multiple types of cells. Thus, we have designed dual-microRNA-controlled double-amplified cascaded logic DNA circuits for cancer cell subtype identification. The basic idea is to improve sensitivity by cascading DNAzyme and hybridization chain reaction (HCR), and improve accuracy by simultaneous detection of miR-122 and miR-21. The in-tube and in-cell experimental results show that the cascaded logic DNA circuits can work and serve to differentiate the liver cancer cells Huh7 from other normal cells and cancer cells. We anticipate that this design can be widely applied in facilitating basic biomedical research and accurate disease diagnosis. Royal Society of Chemistry 2018-11-19 /pmc/articles/PMC6354832/ /pubmed/30809361 http://dx.doi.org/10.1039/c8sc04887h Text en This journal is © The Royal Society of Chemistry 2019 http://creativecommons.org/licenses/by-nc/3.0/ This article is freely available. This article is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported Licence (CC BY-NC 3.0)
spellingShingle Chemistry
Quan, Ke
Li, Jing
Wang, Jiaoli
Xie, Nuli
Wei, Qiaomei
Tang, Jinlu
Yang, Xiaohai
Wang, Kemin
Huang, Jin
Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes
title Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes
title_full Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes
title_fullStr Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes
title_full_unstemmed Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes
title_short Dual-microRNA-controlled double-amplified cascaded logic DNA circuits for accurate discrimination of cell subtypes
title_sort dual-microrna-controlled double-amplified cascaded logic dna circuits for accurate discrimination of cell subtypes
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6354832/
https://www.ncbi.nlm.nih.gov/pubmed/30809361
http://dx.doi.org/10.1039/c8sc04887h
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