Cargando…
A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae
Three dsRNAs, in sizes of approximately 2.5–5 kbp, were detected in the plant pathogenic fungus Nigrospora oryzae strain CS-7.5-4. Genomic analysis showed that the 5.0 kb dsRNA was a victorivirus named as Nigrospora oryzae victorivirus 2 (NoRV2). The genome of NoRV2 was 5166 bp in length containing...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6356909/ https://www.ncbi.nlm.nih.gov/pubmed/30669450 http://dx.doi.org/10.3390/v11010083 |
_version_ | 1783391670250766336 |
---|---|
author | Liu, Hong Liu, Rui Li, Chang Xin Wang, Hui Zhu, Hong Jian Gao, Bi Da Zhou, Qian Zhong, Jie |
author_facet | Liu, Hong Liu, Rui Li, Chang Xin Wang, Hui Zhu, Hong Jian Gao, Bi Da Zhou, Qian Zhong, Jie |
author_sort | Liu, Hong |
collection | PubMed |
description | Three dsRNAs, in sizes of approximately 2.5–5 kbp, were detected in the plant pathogenic fungus Nigrospora oryzae strain CS-7.5-4. Genomic analysis showed that the 5.0 kb dsRNA was a victorivirus named as Nigrospora oryzae victorivirus 2 (NoRV2). The genome of NoRV2 was 5166 bp in length containing two overlapping open reading frames (ORFs), ORF1 and ORF2. ORF1 was deduced to encode a coat protein (CP) showing homology to the CPs of viruses belonging to the Totiviridae family. The stop codon of ORF1 and the start codon of ORF2 were overlapped by the tetranucleotide sequence AUGA. ORF2 was predicted to encode an RNA-dependent RNA polymerase (RdRp), which was highly similar to the RdRps of victoriviruses. Virus-like particle examination demonstrated that the genome of NoRV2 was solely encapsidated by viral particles with a diameter of approximately 35 nm. The other two dsRNAs that were less than 3.0 kb were predicted to be the genomes of two mitoviruses, named as Nigrospora oryzae mitovirus 1 (NoMV1) and Nigrospora oryzae mitovirus 2 (NoMV2). Both NoMV1 and NoMV2 were A-U rich and with lengths of 2865 and 2507 bp, respectively. Mitochondrial codon usage inferred that each of the two mitoviruses contains a major large ORF encoding a mitoviral RdRp. Horizontal transfer experiments showed that the NoMV1 and NoMV2 could be cotransmitted horizontally via hyphal contact to other virus-free N. oryzae strains and causes phenotypic change to the recipient, such as an increase in growth rate. This is the first report of mitoviruses in N. oryzae. |
format | Online Article Text |
id | pubmed-6356909 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-63569092019-02-05 A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae Liu, Hong Liu, Rui Li, Chang Xin Wang, Hui Zhu, Hong Jian Gao, Bi Da Zhou, Qian Zhong, Jie Viruses Article Three dsRNAs, in sizes of approximately 2.5–5 kbp, were detected in the plant pathogenic fungus Nigrospora oryzae strain CS-7.5-4. Genomic analysis showed that the 5.0 kb dsRNA was a victorivirus named as Nigrospora oryzae victorivirus 2 (NoRV2). The genome of NoRV2 was 5166 bp in length containing two overlapping open reading frames (ORFs), ORF1 and ORF2. ORF1 was deduced to encode a coat protein (CP) showing homology to the CPs of viruses belonging to the Totiviridae family. The stop codon of ORF1 and the start codon of ORF2 were overlapped by the tetranucleotide sequence AUGA. ORF2 was predicted to encode an RNA-dependent RNA polymerase (RdRp), which was highly similar to the RdRps of victoriviruses. Virus-like particle examination demonstrated that the genome of NoRV2 was solely encapsidated by viral particles with a diameter of approximately 35 nm. The other two dsRNAs that were less than 3.0 kb were predicted to be the genomes of two mitoviruses, named as Nigrospora oryzae mitovirus 1 (NoMV1) and Nigrospora oryzae mitovirus 2 (NoMV2). Both NoMV1 and NoMV2 were A-U rich and with lengths of 2865 and 2507 bp, respectively. Mitochondrial codon usage inferred that each of the two mitoviruses contains a major large ORF encoding a mitoviral RdRp. Horizontal transfer experiments showed that the NoMV1 and NoMV2 could be cotransmitted horizontally via hyphal contact to other virus-free N. oryzae strains and causes phenotypic change to the recipient, such as an increase in growth rate. This is the first report of mitoviruses in N. oryzae. MDPI 2019-01-19 /pmc/articles/PMC6356909/ /pubmed/30669450 http://dx.doi.org/10.3390/v11010083 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Liu, Hong Liu, Rui Li, Chang Xin Wang, Hui Zhu, Hong Jian Gao, Bi Da Zhou, Qian Zhong, Jie A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae |
title | A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae |
title_full | A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae |
title_fullStr | A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae |
title_full_unstemmed | A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae |
title_short | A Victorivirus and Two Novel Mitoviruses Co-Infected the Plant Pathogen Nigrospora oryzae |
title_sort | victorivirus and two novel mitoviruses co-infected the plant pathogen nigrospora oryzae |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6356909/ https://www.ncbi.nlm.nih.gov/pubmed/30669450 http://dx.doi.org/10.3390/v11010083 |
work_keys_str_mv | AT liuhong avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT liurui avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT lichangxin avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT wanghui avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT zhuhongjian avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT gaobida avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT zhouqian avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT zhongjie avictorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT liuhong victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT liurui victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT lichangxin victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT wanghui victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT zhuhongjian victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT gaobida victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT zhouqian victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae AT zhongjie victorivirusandtwonovelmitovirusescoinfectedtheplantpathogennigrosporaoryzae |