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Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens
Detection of developmental phenotypes in zebrafish embryos typically involves a visual assessment and scoring of morphological features by an individual researcher. Subjective scoring could impact results and be of particular concern when phenotypic effect patterns are also used as a diagnostic tool...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6358258/ https://www.ncbi.nlm.nih.gov/pubmed/30295906 http://dx.doi.org/10.1093/toxsci/kfy250 |
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author | Teixidó, Elisabet Kießling, Tobias R Krupp, Eckart Quevedo, Celia Muriana, Arantza Scholz, Stefan |
author_facet | Teixidó, Elisabet Kießling, Tobias R Krupp, Eckart Quevedo, Celia Muriana, Arantza Scholz, Stefan |
author_sort | Teixidó, Elisabet |
collection | PubMed |
description | Detection of developmental phenotypes in zebrafish embryos typically involves a visual assessment and scoring of morphological features by an individual researcher. Subjective scoring could impact results and be of particular concern when phenotypic effect patterns are also used as a diagnostic tool to classify compounds. Here we introduce a quantitative morphometric approach based on image analysis of zebrafish embryos. A software called FishInspector was developed to detect morphological features from images collected using an automated system to position zebrafish embryos. The analysis was verified and compared with visual assessments of 3 participating laboratories using 3 known developmental toxicants (methotrexate, dexamethasone, and topiramate) and 2 negative compounds (loratadine and glibenclamide). The quantitative approach exhibited higher sensitivity and made it possible to compare patterns of effects with the potential to establish a grouping and classification of developmental toxicants. Our approach improves the robustness of phenotype scoring and reliability of assay performance and, hence, is anticipated to improve the predictivity of developmental toxicity screening using the zebrafish embryo. |
format | Online Article Text |
id | pubmed-6358258 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-63582582019-02-08 Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens Teixidó, Elisabet Kießling, Tobias R Krupp, Eckart Quevedo, Celia Muriana, Arantza Scholz, Stefan Toxicol Sci Automatic Analysis for Zebrafish Research Detection of developmental phenotypes in zebrafish embryos typically involves a visual assessment and scoring of morphological features by an individual researcher. Subjective scoring could impact results and be of particular concern when phenotypic effect patterns are also used as a diagnostic tool to classify compounds. Here we introduce a quantitative morphometric approach based on image analysis of zebrafish embryos. A software called FishInspector was developed to detect morphological features from images collected using an automated system to position zebrafish embryos. The analysis was verified and compared with visual assessments of 3 participating laboratories using 3 known developmental toxicants (methotrexate, dexamethasone, and topiramate) and 2 negative compounds (loratadine and glibenclamide). The quantitative approach exhibited higher sensitivity and made it possible to compare patterns of effects with the potential to establish a grouping and classification of developmental toxicants. Our approach improves the robustness of phenotype scoring and reliability of assay performance and, hence, is anticipated to improve the predictivity of developmental toxicity screening using the zebrafish embryo. Oxford University Press 2019-02 2018-10-08 /pmc/articles/PMC6358258/ /pubmed/30295906 http://dx.doi.org/10.1093/toxsci/kfy250 Text en © The Author(s) 2018. Published by Oxford University Press on behalf of the Society of Toxicology. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Automatic Analysis for Zebrafish Research Teixidó, Elisabet Kießling, Tobias R Krupp, Eckart Quevedo, Celia Muriana, Arantza Scholz, Stefan Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens |
title | Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens |
title_full | Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens |
title_fullStr | Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens |
title_full_unstemmed | Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens |
title_short | Automated Morphological Feature Assessment for Zebrafish Embryo Developmental Toxicity Screens |
title_sort | automated morphological feature assessment for zebrafish embryo developmental toxicity screens |
topic | Automatic Analysis for Zebrafish Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6358258/ https://www.ncbi.nlm.nih.gov/pubmed/30295906 http://dx.doi.org/10.1093/toxsci/kfy250 |
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