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Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach

Inhibitors of chymase have good potential to provide a novel therapeutic approach for the treatment of cardiovascular diseases. We used a computational approach based on pharmacophore modeling, docking, and molecular dynamics simulations to evaluate the potential ability of 13 natural compounds from...

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Autores principales: Dubey, Amit, Dotolo, Serena, Ramteke, Pramod W., Facchiano, Angelo, Marabotti, Anna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6358779/
https://www.ncbi.nlm.nih.gov/pubmed/30583487
http://dx.doi.org/10.3390/biom9010005
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author Dubey, Amit
Dotolo, Serena
Ramteke, Pramod W.
Facchiano, Angelo
Marabotti, Anna
author_facet Dubey, Amit
Dotolo, Serena
Ramteke, Pramod W.
Facchiano, Angelo
Marabotti, Anna
author_sort Dubey, Amit
collection PubMed
description Inhibitors of chymase have good potential to provide a novel therapeutic approach for the treatment of cardiovascular diseases. We used a computational approach based on pharmacophore modeling, docking, and molecular dynamics simulations to evaluate the potential ability of 13 natural compounds from chamomile extracts to bind chymase enzyme. The results indicated that some chamomile compounds can bind to the active site of human chymase. In particular, chlorogenic acid had a predicted binding energy comparable or even better than that of some known chymase inhibitors, interacted stably with key amino acids in the chymase active site, and appeared to be more selective for chymase than other serine proteases. Therefore, chlorogenic acid is a promising starting point for developing new chymase inhibitors.
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spelling pubmed-63587792019-02-11 Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach Dubey, Amit Dotolo, Serena Ramteke, Pramod W. Facchiano, Angelo Marabotti, Anna Biomolecules Article Inhibitors of chymase have good potential to provide a novel therapeutic approach for the treatment of cardiovascular diseases. We used a computational approach based on pharmacophore modeling, docking, and molecular dynamics simulations to evaluate the potential ability of 13 natural compounds from chamomile extracts to bind chymase enzyme. The results indicated that some chamomile compounds can bind to the active site of human chymase. In particular, chlorogenic acid had a predicted binding energy comparable or even better than that of some known chymase inhibitors, interacted stably with key amino acids in the chymase active site, and appeared to be more selective for chymase than other serine proteases. Therefore, chlorogenic acid is a promising starting point for developing new chymase inhibitors. MDPI 2018-12-21 /pmc/articles/PMC6358779/ /pubmed/30583487 http://dx.doi.org/10.3390/biom9010005 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dubey, Amit
Dotolo, Serena
Ramteke, Pramod W.
Facchiano, Angelo
Marabotti, Anna
Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach
title Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach
title_full Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach
title_fullStr Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach
title_full_unstemmed Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach
title_short Searching for Chymase Inhibitors among Chamomile Compounds Using a Computational-Based Approach
title_sort searching for chymase inhibitors among chamomile compounds using a computational-based approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6358779/
https://www.ncbi.nlm.nih.gov/pubmed/30583487
http://dx.doi.org/10.3390/biom9010005
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