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Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones
Intramolecular hydrogen bond (IMHB) interactions have attracted considerable attention due to their central role in molecular structure, chemical reactivity, and interactions of biologically active molecules. Precise correlations of the strength of IMHB’s with experimental parameters are a key goal...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6359028/ https://www.ncbi.nlm.nih.gov/pubmed/30646498 http://dx.doi.org/10.3390/molecules24020280 |
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author | Martínez-Cifuentes, Maximiliano Monroy-Cárdenas, Matías Millas-Vargas, Juan Pablo Weiss-López, Boris E. Araya-Maturana, Ramiro |
author_facet | Martínez-Cifuentes, Maximiliano Monroy-Cárdenas, Matías Millas-Vargas, Juan Pablo Weiss-López, Boris E. Araya-Maturana, Ramiro |
author_sort | Martínez-Cifuentes, Maximiliano |
collection | PubMed |
description | Intramolecular hydrogen bond (IMHB) interactions have attracted considerable attention due to their central role in molecular structure, chemical reactivity, and interactions of biologically active molecules. Precise correlations of the strength of IMHB’s with experimental parameters are a key goal in order to model compounds for drug discovery. In this work, we carry out an experimental (NMR) and theoretical (DFT) study of the IMHB in a series of structurally similar o-carbonyl hydroquinones. Geometrical parameters, as well as Natural Bond Orbital (NBO) and Quantum Theory of Atoms in Molecules (QTAIM) parameters for IMHB were compared with experimental NMR data. Three DFT functionals were employed to calculated theoretical parameters: B3LYP, M06-2X, and ωB97XD. O(…)H distance is the most suitable geometrical parameter to distinguish among similar IMHBs. Second order stabilization energies ΔE(ij)((2)) from NBO analysis and hydrogen bond energy (E(HB)) obtained from QTAIM analysis also properly distinguishes the order in strength of the studied IMHB. ΔE(ij)((2)) from NBO give values for the IMHB below 30 kcal/mol, while E(HB) from QTAIM analysis give values above 30 kcal/mol. In all cases, the calculated parameters using ωB97XD give the best correlations with experimental (1)H-NMR chemical shifts for the IMHB, with R(2) values around 0.89. Although the results show that these parameters correctly reflect the strength of the IMHB, when the weakest one is removed from the analysis, arguing experimental considerations, correlations improve significantly to values around 0.95 for R(2). |
format | Online Article Text |
id | pubmed-6359028 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-63590282019-02-06 Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones Martínez-Cifuentes, Maximiliano Monroy-Cárdenas, Matías Millas-Vargas, Juan Pablo Weiss-López, Boris E. Araya-Maturana, Ramiro Molecules Article Intramolecular hydrogen bond (IMHB) interactions have attracted considerable attention due to their central role in molecular structure, chemical reactivity, and interactions of biologically active molecules. Precise correlations of the strength of IMHB’s with experimental parameters are a key goal in order to model compounds for drug discovery. In this work, we carry out an experimental (NMR) and theoretical (DFT) study of the IMHB in a series of structurally similar o-carbonyl hydroquinones. Geometrical parameters, as well as Natural Bond Orbital (NBO) and Quantum Theory of Atoms in Molecules (QTAIM) parameters for IMHB were compared with experimental NMR data. Three DFT functionals were employed to calculated theoretical parameters: B3LYP, M06-2X, and ωB97XD. O(…)H distance is the most suitable geometrical parameter to distinguish among similar IMHBs. Second order stabilization energies ΔE(ij)((2)) from NBO analysis and hydrogen bond energy (E(HB)) obtained from QTAIM analysis also properly distinguishes the order in strength of the studied IMHB. ΔE(ij)((2)) from NBO give values for the IMHB below 30 kcal/mol, while E(HB) from QTAIM analysis give values above 30 kcal/mol. In all cases, the calculated parameters using ωB97XD give the best correlations with experimental (1)H-NMR chemical shifts for the IMHB, with R(2) values around 0.89. Although the results show that these parameters correctly reflect the strength of the IMHB, when the weakest one is removed from the analysis, arguing experimental considerations, correlations improve significantly to values around 0.95 for R(2). MDPI 2019-01-14 /pmc/articles/PMC6359028/ /pubmed/30646498 http://dx.doi.org/10.3390/molecules24020280 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Martínez-Cifuentes, Maximiliano Monroy-Cárdenas, Matías Millas-Vargas, Juan Pablo Weiss-López, Boris E. Araya-Maturana, Ramiro Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones |
title | Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones |
title_full | Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones |
title_fullStr | Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones |
title_full_unstemmed | Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones |
title_short | Assessing Parameter Suitability for the Strength Evaluation of Intramolecular Resonance Assisted Hydrogen Bonding in o-Carbonyl Hydroquinones |
title_sort | assessing parameter suitability for the strength evaluation of intramolecular resonance assisted hydrogen bonding in o-carbonyl hydroquinones |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6359028/ https://www.ncbi.nlm.nih.gov/pubmed/30646498 http://dx.doi.org/10.3390/molecules24020280 |
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